RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 PRLHP81277 87 aa12.33□□□□□ -0.44
PACS2-210ENST00000550790 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
PACS2-210ENST00000550790 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.44
PACS2-210ENST00000550790 MUC17Q685J3 4493 aa12.33□□□□□ -0.44
PACS2-210ENST00000550790 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
PACS2-210ENST00000550790 LINC00304Q8N9R0 145 aa12.32□□□□□ -0.44
PACS2-210ENST00000550790 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
PACS2-210ENST00000550790 FAT4Q6V0I7 4981 aa12.32□□□□□ -0.44
PACS2-210ENST00000550790 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
PACS2-210ENST00000550790 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
PACS2-210ENST00000550790 CTAG1AP78358 180 aa12.3□□□□□ -0.44
PACS2-210ENST00000550790 IGKV2D-26A0A0A0MRZ7 120 aa12.29□□□□□ -0.44
PACS2-210ENST00000550790 LINC00310P59036 64 aa12.29□□□□□ -0.44
PACS2-210ENST00000550790 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
PACS2-210ENST00000550790 ATP6V1G1O75348 118 aa12.28□□□□□ -0.44
PACS2-210ENST00000550790 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
PACS2-210ENST00000550790 RETNLBQ9BQ08 111 aa12.28□□□□□ -0.44
PACS2-210ENST00000550790 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
PACS2-210ENST00000550790 A0A0U1RQV1 116 aa12.24□□□□□ -0.45
PACS2-210ENST00000550790 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
PACS2-210ENST00000550790 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
PACS2-210ENST00000550790 S100A1P23297 94 aa12.23□□□□□ -0.45
PACS2-210ENST00000550790 TPRXLQ17RH7 258 aa12.23□□□□□ -0.45
PACS2-210ENST00000550790 CHTOPQ9Y3Y2 248 aaKnown RBP12.23□□□□□ -0.45
PACS2-210ENST00000550790 LINC00158P58513 81 aa12.22□□□□□ -0.45
PACS2-210ENST00000550790 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.45
PACS2-210ENST00000550790 IGLV7-46A0A075B6I9 117 aa12.2□□□□□ -0.46
PACS2-210ENST00000550790 LCE2AQ5TA79 106 aaPredicted RBP12.2□□□□□ -0.46
PACS2-210ENST00000550790 SERF1AO75920 110 aa12.19□□□□□ -0.46
PACS2-210ENST00000550790 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
PACS2-210ENST00000550790 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
PACS2-210ENST00000550790 A0A0U1RRA0 63 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
PACS2-210ENST00000550790 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
PACS2-210ENST00000550790 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
PACS2-210ENST00000550790 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
PACS2-210ENST00000550790 FAM19A2Q8N3H0 131 aa12.16□□□□□ -0.46
PACS2-210ENST00000550790 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
PACS2-210ENST00000550790 SPRR1AP35321 89 aa12.15□□□□□ -0.46
PACS2-210ENST00000550790 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.46
PACS2-210ENST00000550790 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
PACS2-210ENST00000550790 HSBP1O75506 76 aa12.13□□□□□ -0.47
PACS2-210ENST00000550790 LINC00337Q8N6G1 96 aa12.13□□□□□ -0.47
PACS2-210ENST00000550790 PRYO14603 147 aa12.12□□□□□ -0.47
PACS2-210ENST00000550790 BOD1L2Q8IYS8 172 aa12.12□□□□□ -0.47
PACS2-210ENST00000550790 PPDPFQ9H3Y8 114 aa12.12□□□□□ -0.47
PACS2-210ENST00000550790 HERV-K104P63124 156 aa12.11□□□□□ -0.47
PACS2-210ENST00000550790 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
PACS2-210ENST00000550790 SMCR5Q8TEV8 140 aa12.1□□□□□ -0.47
PACS2-210ENST00000550790 ZNF706Q9Y5V0 76 aaPredicted RBP12.1□□□□□ -0.47
PACS2-210ENST00000550790 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
PACS2-210ENST00000550790 NCR3O14931 201 aa12.08□□□□□ -0.48
PACS2-210ENST00000550790 MEIG1Q5JSS6 88 aa12.08□□□□□ -0.48
PACS2-210ENST00000550790 KRTAP9-2Q9BYQ4 174 aa12.08□□□□□ -0.48
PACS2-210ENST00000550790 NDUFA12Q9UI09 145 aa12.08□□□□□ -0.48
PACS2-210ENST00000550790 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
PACS2-210ENST00000550790 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
PACS2-210ENST00000550790 TRBV10-3A0A0K0K1G6 114 aa12.06□□□□□ -0.48
PACS2-210ENST00000550790 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
PACS2-210ENST00000550790 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
PACS2-210ENST00000550790 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
PACS2-210ENST00000550790 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
PACS2-210ENST00000550790 DAND5Q8N907 189 aa12.05□□□□□ -0.48
PACS2-210ENST00000550790 Q8NBF4 154 aa12.05□□□□□ -0.48
PACS2-210ENST00000550790 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
PACS2-210ENST00000550790 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
PACS2-210ENST00000550790 ETDCA0A1B0GVM5 59 aa12.03□□□□□ -0.48
PACS2-210ENST00000550790 TSPEAR-AS2P59090 65 aa12.03□□□□□ -0.48
PACS2-210ENST00000550790 B5MCH6 92 aa12.01□□□□□ -0.49
PACS2-210ENST00000550790 SPINK1P00995 79 aa12.01□□□□□ -0.49
PACS2-210ENST00000550790 KRTAP13-3Q3SY46 172 aa12.01□□□□□ -0.49
PACS2-210ENST00000550790 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
PACS2-210ENST00000550790 LEPROTO15243 131 aa11.99□□□□□ -0.49
PACS2-210ENST00000550790 ERC2-IT1O76042 136 aa11.99□□□□□ -0.49
PACS2-210ENST00000550790 FABP4P15090 132 aa11.99□□□□□ -0.49
PACS2-210ENST00000550790 TRBV10-2A0A0K0K1G8 114 aa11.98□□□□□ -0.49
PACS2-210ENST00000550790 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
PACS2-210ENST00000550790 H0Y8G0 127 aa11.96□□□□□ -0.49
PACS2-210ENST00000550790 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
PACS2-210ENST00000550790 Q9BRP9 147 aa11.96□□□□□ -0.49
PACS2-210ENST00000550790 DDTP30046 118 aa11.95□□□□□ -0.5
PACS2-210ENST00000550790 SSBP3-AS1Q7Z2R9 100 aa11.95□□□□□ -0.5
PACS2-210ENST00000550790 J3QQQ9 107 aa11.94□□□□□ -0.5
PACS2-210ENST00000550790 PLNP26678 52 aa11.94□□□□□ -0.5
PACS2-210ENST00000550790 S100A12P80511 92 aa11.94□□□□□ -0.5
PACS2-210ENST00000550790 ASB16-AS1Q495Z4 193 aa11.94□□□□□ -0.5
PACS2-210ENST00000550790 IGLV6-57P01721 117 aa11.93□□□□□ -0.5
PACS2-210ENST00000550790 RPS29P62273 56 aaKnown RBP11.92□□□□□ -0.5
PACS2-210ENST00000550790 Q6ZRX8 168 aa11.92□□□□□ -0.5
PACS2-210ENST00000550790 SYS1-DBNDD2H3BUS1 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms