RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-225	ENST00000550715		A8MWV9	139 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715		H7C1H1	209 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715		M0R2P5	195 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	TSPAN13	O95857	204 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	HSD52	Q0P140	79 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	MPV17L2	Q567V2	206 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	C6orf226	Q5I0X4	101 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	FAM74A4	Q5TZK3	123 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	TMEM141	Q96I45	108 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	SCGB3A1	Q96QR1	104 aa		4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	CSDC2	Q9Y534	153 aa	Known RBP	4.6	□□□□□ -1.67
LETMD1-225	ENST00000550715	IGLV4-69	A0A075B6H9	119 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	PCP2	Q8IVA1	136 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	TYMSOS	Q8TAI1	123 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	ORAOV1	Q8WV07	137 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	DNAJC30	Q96LL9	226 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	SPANXA1	Q9NS26	97 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	HIGD1B	Q9P298	99 aa		4.59	□□□□□ -1.67
LETMD1-225	ENST00000550715	NMU	P48645	174 aa		4.58	□□□□□ -1.68
LETMD1-225	ENST00000550715	SEC11A	P67812	179 aa		4.58	□□□□□ -1.68
LETMD1-225	ENST00000550715	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
LETMD1-225	ENST00000550715	CFAP126	Q5VTH2	177 aa		4.58	□□□□□ -1.68
LETMD1-225	ENST00000550715	SDIM1	Q6ZPB5	146 aa		4.58	□□□□□ -1.68
LETMD1-225	ENST00000550715	LOC100131303	A0A0U1RQF7	123 aa		4.57	□□□□□ -1.68
LETMD1-225	ENST00000550715		E9PLD3	99 aa		4.57	□□□□□ -1.68
LETMD1-225	ENST00000550715		I3L3M4	83 aa		4.57	□□□□□ -1.68
LETMD1-225	ENST00000550715	TAX1BP3	O14907	124 aa		4.57	□□□□□ -1.68
LETMD1-225	ENST00000550715	C20orf203	Q8NBC4	194 aa		4.57	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRBV25-1	A0A075B6N4	114 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRAV8-3	A0A0A6YYJ7	113 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715		K7ERU9	68 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	RPL39	P62891	51 aa	Known RBP	4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	PMVK	Q15126	192 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	SPINK6	Q6UWN8	80 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	ATP6V0E2	Q8NHE4	81 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	DPH3	Q96FX2	82 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	TTTY13	Q9BZ97	58 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	CST9L	Q9H4G1	147 aa		4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	MRPL16	Q9NX20	251 aa	Known RBP	4.56	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRAV8-6	A0A0B4J262	113 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRGV4	A0A0C4DH28	118 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	C11orf86	A6NJI1	115 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	PRR3	P79522	188 aa	Known RBP	4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	TAL2	Q16559	108 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715		Q1RN00	199 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	DAZ4	Q86SG3	579 aa	Known RBP	4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	FAM104A	Q969W3	186 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	CHCHD7	Q9BUK0	85 aa		4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	DAZ3	Q9NR90	486 aa	Known RBP	4.55	□□□□□ -1.68
LETMD1-225	ENST00000550715	MUC17	Q685J3	4493 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	SYNE2	Q8WXH0	6885 aa	Known RBP	4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRBV7-3	A0A075B6L6	115 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	IGHV3-73	A0A0B4J1V6	119 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRBV10-1	A0A0K0K1A3	114 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	MYMX	A0A1B0GTQ4	84 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715		A6NDN8	102 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715		H3BRM9	83 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	CIRBP	Q14011	172 aa	Known RBP	4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715		Q6ZVH6	145 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	C9orf163	Q8N9P6	203 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	AMELX	Q99217	191 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	PRADC1	Q9BSG0	188 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715		Q9UF83	564 aa		4.54	□□□□□ -1.68
LETMD1-225	ENST00000550715	IGKV2D-24	A0A075B6R9	120 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	TRAV4	A0A0B4J268	109 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	FXYD2	P54710	66 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	KRTAP10-6	P60371	365 aa	Predicted RBP	4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	CKS1B	P61024	79 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	HERVK_113	P61574	105 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	CXCL6	P80162	114 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	OR5A1	Q8NGJ0	315 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	TIMM21	Q9BVV7	248 aa		4.53	□□□□□ -1.68
LETMD1-225	ENST00000550715	TMEM223	A0PJW6	202 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	CHTF8	P0CG12	524 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	ZNF22	P17026	224 aa	Predicted RBP	4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	TSPEAR-AS2	P59090	65 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	MRPS36	P82909	103 aa	Known RBP	4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	CEND1	Q8N111	149 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	UBE2D4	Q9Y2X8	147 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715		V9GYY9	64 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715	SSPO	A2VEC9	5147 aa		4.52	□□□□□ -1.69
LETMD1-225	ENST00000550715		A0A1B0GWB2	263 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	ZNF815P	A8K554	130 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	CCL25	O15444	150 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	LINC00694	P0DN24	101 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	UBE2D3	P61077	147 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	UBE2D2	P62837	147 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715		Q6ZUT4	128 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	C7orf33	Q8WU49	177 aa		4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.51	□□□□□ -1.69
LETMD1-225	ENST00000550715	TRBV6-4	A0A1B0GX49	114 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	LEPROT	O15243	131 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	OCIAD2	Q56VL3	154 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	TMEM170B	Q5T4T1	132 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	FAM19A3	Q7Z5A8	133 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	PLEKHB2	Q96CS7	222 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	PLAC8	Q9NZF1	115 aa		4.5	□□□□□ -1.69
LETMD1-225	ENST00000550715	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.49	□□□□□ -1.69
LETMD1-225	ENST00000550715	TINCR	A0A1B0GVN0	87 aa		4.49	□□□□□ -1.69

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