RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CCL18P55774 89 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 SMIM11AP58511 58 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 DIAPH2-AS1Q14236 149 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 LINC01545Q5VT33 79 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 Q8N6K4 173 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 OR10AC1Q8NH08 325 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 LSM10Q969L4 123 aaKnown RBP2.05□□□□□ -2.08
LIMA1-205ENST00000550592 C2orf50Q96LR7 162 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 MGST2Q99735 147 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 AGPAT4-IT1Q9H0P7 198 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 SLC39A9Q9NUM3 307 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 GNG13Q9P2W3 67 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 TNXBP22105 4242 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 TRBV19A0A075B6N1 114 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV1-1A0A0B4J248 108 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 FXYD1O00168 92 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 SDCBPO00560 298 aaPredicted RBP2.04□□□□□ -2.08
LIMA1-205ENST00000550592 SSSCA1O60232 199 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 CST7O76096 145 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 COX8AP10176 69 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 COX7CP15954 63 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 CBLN1P23435 193 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 TSPEAR-AS2P59090 65 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 KRTAP10-4P60372 401 aaPredicted RBP2.04□□□□□ -2.08
LIMA1-205ENST00000550592 RPL38P63173 70 aaKnown RBP2.04□□□□□ -2.08
LIMA1-205ENST00000550592 MRPS36P82909 103 aaKnown RBP2.04□□□□□ -2.08
LIMA1-205ENST00000550592 RPL18Q07020 188 aaKnown RBP2.04□□□□□ -2.08
LIMA1-205ENST00000550592 Q5XG85 94 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 LINC00305Q7Z4B0 112 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 C6orf201Q7Z4U5 140 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 CARD19Q96LW7 228 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 DPH3P1Q9H4G8 78 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 CKLFQ9UBR5 152 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
LIMA1-205ENST00000550592 C19orf71A6NCJ1 209 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 A6NIN4 97 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 C2orf70A6NJV1 201 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 M0R129 80 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 M0R135 149 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 ATOX1O00244 68 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 UBE2L6O14933 153 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 NUPR1O60356 82 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 NPPCP23582 126 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 NPC2P61916 151 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 UBE2L3P68036 154 aaKnown RBP2.03□□□□□ -2.08
LIMA1-205ENST00000550592 CYP2G1PQ6ZSU1 146 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 ATP5L2Q7Z4Y8 100 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 CLECL1Q8IZS7 167 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 SPTSSAQ969W0 71 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 SMIM7Q9BQ49 75 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 BCL2L10Q9HD36 194 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 OTORQ9NRC9 128 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 CMC2Q9NRP2 79 aa2.03□□□□□ -2.08
LIMA1-205ENST00000550592 A0A087WTM6 91 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 IGHV3-73A0A0B4J1V6 119 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 TRAV4A0A0B4J268 109 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 A0A0J9YX75 114 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 RBAKDNA6NC62 111 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 H3BT86 120 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 H3BUA1 57 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 IGKCP01834 107 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 GYPBP06028 91 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 ACYP1P07311 99 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 C12orf73Q69YU5 71 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 AMELYQ99218 206 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 DNAJC15Q9Y5T4 150 aa2.02□□□□□ -2.09
LIMA1-205ENST00000550592 TRAV8-1A0A0A6YYK1 113 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 IGHV1-58A0A0C4DH39 117 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 TRBV7-7A0A0K0K1E9 115 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 LOC107986453A0A1B0GWG9 222 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 CEBPZOSA8MTT3 80 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 PGLYRP1O75594 196 aaPredicted RBP2.01□□□□□ -2.09
LIMA1-205ENST00000550592 TCRAP04437 139 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 SPART-AS1P0CW21 52 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 HLA-DRB4P13762 266 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 HTN3P15516 51 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 S100A3P33764 101 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 RPL37AP61513 92 aaKnown RBP2.01□□□□□ -2.09
LIMA1-205ENST00000550592 QRFPP83859 136 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
LIMA1-205ENST00000550592 LHFPL1Q86WI0 220 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 PRR15Q8IV56 129 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 LINC00311Q8N616 119 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 Q8NDZ9 215 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 TSKUQ8WUA8 353 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 USMG5Q96IX5 58 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 GPX7Q96SL4 187 aaPredicted RBP2.01□□□□□ -2.09
LIMA1-205ENST00000550592 NXT2Q9NPJ8 142 aaKnown RBP2.01□□□□□ -2.09
LIMA1-205ENST00000550592 HIGD1BQ9P298 99 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 LHFPL6Q9Y693 200 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 HLA-DRB4X5D2U9 266 aa2.01□□□□□ -2.09
LIMA1-205ENST00000550592 TRAV3A0A0B4J244 114 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 IGHV1-24A0A0C4DH33 117 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 LEPROTL1O95214 131 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 CCL20P78556 96 aa2□□□□□ -2.09
LIMA1-205ENST00000550592 SS18Q15532 418 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms