RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.04
NR4A1-215ENST00000550557 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.04
NR4A1-215ENST00000550557 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
NR4A1-215ENST00000550557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.52□□□□□ -1.05
NR4A1-215ENST00000550557 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
NR4A1-215ENST00000550557 F8WDY8 70 aa8.51□□□□□ -1.05
NR4A1-215ENST00000550557 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
NR4A1-215ENST00000550557 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
NR4A1-215ENST00000550557 Q8NAQ8 132 aa8.51□□□□□ -1.05
NR4A1-215ENST00000550557 KRTAP1-1Q07627 177 aa8.51□□□□□ -1.05
NR4A1-215ENST00000550557 Q6ZQY7 126 aa8.51□□□□□ -1.05
NR4A1-215ENST00000550557 SMIM11BQ8TCY0 68 aa8.51□□□□□ -1.05
NR4A1-215ENST00000550557 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
NR4A1-215ENST00000550557 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
NR4A1-215ENST00000550557 SPTBN5Q9NRC6 3674 aaKnown RBP8.5□□□□□ -1.05
NR4A1-215ENST00000550557 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
NR4A1-215ENST00000550557 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
NR4A1-215ENST00000550557 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
NR4A1-215ENST00000550557 KRTAP10-3P60369 221 aa8.47□□□□□ -1.05
NR4A1-215ENST00000550557 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
NR4A1-215ENST00000550557 Q6ZRU5 148 aa8.46□□□□□ -1.06
NR4A1-215ENST00000550557 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.06
NR4A1-215ENST00000550557 LINC00588Q9Y4M8 146 aa8.46□□□□□ -1.06
NR4A1-215ENST00000550557 AKAP13Q12802 2813 aa8.46□□□□□ -1.06
NR4A1-215ENST00000550557 COL6A5A8TX70 2615 aa8.45□□□□□ -1.06
NR4A1-215ENST00000550557 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
NR4A1-215ENST00000550557 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
NR4A1-215ENST00000550557 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
NR4A1-215ENST00000550557 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
NR4A1-215ENST00000550557 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
NR4A1-215ENST00000550557 UNC79Q9P2D8 2635 aa8.43□□□□□ -1.06
NR4A1-215ENST00000550557 SMIM26A0A096LP01 95 aa8.43□□□□□ -1.06
NR4A1-215ENST00000550557 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
NR4A1-215ENST00000550557 CASC2Q6XLA1 102 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 PRR15LQ9BU68 103 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 CHD6Q8TD26 2715 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 EYSQ5T1H1 3165 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 RTL8CO15255 209 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
NR4A1-215ENST00000550557 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
NR4A1-215ENST00000550557 TNRC18O15417 2968 aaPredicted RBP8.41□□□□□ -1.06
NR4A1-215ENST00000550557 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
NR4A1-215ENST00000550557 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.06
NR4A1-215ENST00000550557 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.07
NR4A1-215ENST00000550557 CELSR3Q9NYQ7 3312 aa8.4□□□□□ -1.07
NR4A1-215ENST00000550557 Q8N814 137 aa8.39□□□□□ -1.07
NR4A1-215ENST00000550557 K7ERS5 55 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 J3QL48 77 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 IGSF10Q6WRI0 2623 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
NR4A1-215ENST00000550557 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
NR4A1-215ENST00000550557 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
NR4A1-215ENST00000550557 A0A087WYN8 130 aa8.37□□□□□ -1.07
NR4A1-215ENST00000550557 Q8N9L7 120 aa8.37□□□□□ -1.07
NR4A1-215ENST00000550557 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
NR4A1-215ENST00000550557 A8MTW9 85 aa8.36□□□□□ -1.07
NR4A1-215ENST00000550557 TM2D3Q9BRN9 247 aa8.36□□□□□ -1.07
NR4A1-215ENST00000550557 PRYO14603 147 aa8.36□□□□□ -1.07
NR4A1-215ENST00000550557 SPEGQ15772 3267 aa8.35□□□□□ -1.07
NR4A1-215ENST00000550557 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
NR4A1-215ENST00000550557 PRLHP81277 87 aa8.35□□□□□ -1.07
NR4A1-215ENST00000550557 COL6A3P12111 3177 aa8.35□□□□□ -1.07
NR4A1-215ENST00000550557 TRBV7-7A0A0K0K1E9 115 aa8.35□□□□□ -1.07
NR4A1-215ENST00000550557 Q9UF83 564 aa8.35□□□□□ -1.07
NR4A1-215ENST00000550557 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
NR4A1-215ENST00000550557 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
NR4A1-215ENST00000550557 GCN1Q92616 2671 aaKnown RBP8.34□□□□□ -1.07
NR4A1-215ENST00000550557 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
NR4A1-215ENST00000550557 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
NR4A1-215ENST00000550557 Q9BRP9 147 aa8.33□□□□□ -1.08
NR4A1-215ENST00000550557 FRYLO94915 3013 aa8.33□□□□□ -1.08
NR4A1-215ENST00000550557 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
NR4A1-215ENST00000550557 DNAH10OSP0CZ25 163 aa8.33□□□□□ -1.08
NR4A1-215ENST00000550557 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
NR4A1-215ENST00000550557 LITAFQ99732 161 aa8.32□□□□□ -1.08
NR4A1-215ENST00000550557 Q8N3U1 123 aa8.31□□□□□ -1.08
NR4A1-215ENST00000550557 A6NED7 52 aa8.31□□□□□ -1.08
NR4A1-215ENST00000550557 Q6ZRP5 223 aa8.31□□□□□ -1.08
NR4A1-215ENST00000550557 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
NR4A1-215ENST00000550557 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
NR4A1-215ENST00000550557 A0A087WVE0 104 aa8.29□□□□□ -1.08
NR4A1-215ENST00000550557 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
NR4A1-215ENST00000550557 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
NR4A1-215ENST00000550557 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.08
NR4A1-215ENST00000550557 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
NR4A1-215ENST00000550557 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
NR4A1-215ENST00000550557 FRYQ5TBA9 3013 aa8.27□□□□□ -1.09
NR4A1-215ENST00000550557 CRYGAP11844 174 aa8.26□□□□□ -1.09
NR4A1-215ENST00000550557 FAM30AQ9NZY2 134 aa8.26□□□□□ -1.09
NR4A1-215ENST00000550557 BCE1O60756 84 aa8.26□□□□□ -1.09
NR4A1-215ENST00000550557 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
NR4A1-215ENST00000550557 NBEAQ8NFP9 2946 aa8.25□□□□□ -1.09
NR4A1-215ENST00000550557 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
NR4A1-215ENST00000550557 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
NR4A1-215ENST00000550557 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
NR4A1-215ENST00000550557 LINC00846Q9NV44 126 aa8.25□□□□□ -1.09
NR4A1-215ENST00000550557 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
NR4A1-215ENST00000550557 CXCL6P80162 114 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms