RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DOPEY2Q9Y3R5 2298 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 SLIT1O75093 1534 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 UGGT2Q9NYU1 1516 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 CFDP00746 253 aaPredicted RBP0.56□□□□□ -2.32
CCDC38-208ENST00000549876 COX8AP10176 69 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 COX6B1P14854 86 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 RPL38P63173 70 aaKnown RBP0.56□□□□□ -2.32
CCDC38-208ENST00000549876 Q5VSD8 79 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 GAFA1Q96PS6 74 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 CRIPTQ9P021 101 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 CACNA1HO95180 2353 aa0.56□□□□□ -2.32
CCDC38-208ENST00000549876 POLR1AO95602 1720 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-208ENST00000549876 MYO5CQ9NQX4 1742 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 CEP170BQ9Y4F5 1589 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-208ENST00000549876 TRAV21A0A0B4J279 112 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 SPTY2D1-AS1A0A0U1RR47 76 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 K7EQZ3 153 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 COX7BP24311 80 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 IFI27P40305 119 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-208ENST00000549876 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-208ENST00000549876 ARFGEF2Q9Y6D5 1785 aa0.55□□□□□ -2.32
CCDC38-208ENST00000549876 A0A087WXM4 84 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 FXYD6-FXYD2A0A087WZ82 144 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 I3L3M4 83 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 SPINK6Q6UWN8 80 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 WFDC9Q8NEX5 89 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 BCORQ6W2J9 1755 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 ANKRD50Q9ULJ7 1429 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 DUOX2Q9NRD8 1548 aa0.54□□□□□ -2.32
CCDC38-208ENST00000549876 IQGAP3Q86VI3 1631 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 CFAP43Q8NDM7 1665 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 MEGF8Q7Z7M0 2845 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 TSC2P49815 1807 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 CCL22O00626 93 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 DEFA5Q01523 94 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 ANKRD17O75179 2603 aaKnown RBP0.53□□□□□ -2.32
CCDC38-208ENST00000549876 CLIP1P30622 1438 aa0.53□□□□□ -2.32
CCDC38-208ENST00000549876 USF3Q68DE3 2245 aa0.53□□□□□ -2.33
CCDC38-208ENST00000549876 DNMBPQ6XZF7 1577 aa0.53□□□□□ -2.33
CCDC38-208ENST00000549876 FMN2Q9NZ56 1722 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 C2CD3Q4AC94 2353 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 CPSF4LA6NMK7 179 aaKnown RBP0.52□□□□□ -2.33
CCDC38-208ENST00000549876 CD163L1Q9NR16 1453 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 USP32Q8NFA0 1604 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 ZC3H13Q5T200 1668 aaKnown RBP0.52□□□□□ -2.33
CCDC38-208ENST00000549876 FRAS1Q86XX4 4008 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 TTC28Q96AY4 2481 aa0.52□□□□□ -2.33
CCDC38-208ENST00000549876 LCE6AA0A183 80 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 SPTBN2O15020 2390 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 PRH1P02810 166 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 PTPRZ1P23471 2315 aaPredicted RBP0.51□□□□□ -2.33
CCDC38-208ENST00000549876 CACNA1EQ15878 2313 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 PLCH1Q4KWH8 1693 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 ERICH3Q5RHP9 1530 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 PREX1Q8TCU6 1659 aa0.51□□□□□ -2.33
CCDC38-208ENST00000549876 PTPRQQ9UMZ3 2332 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 DOT1LQ8TEK3 1739 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 ZNF831Q5JPB2 1677 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 CICQ96RK0 1608 aaPredicted RBP0.5□□□□□ -2.33
CCDC38-208ENST00000549876 NWD1Q149M9 1564 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 SMIM31A0A1B0GVY4 71 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 IFI6P09912 130 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 NREPQ16612 68 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 Q5BKY6 102 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 HEPN1Q6WQI6 88 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 COX6B2Q6YFQ2 88 aa0.5□□□□□ -2.33
CCDC38-208ENST00000549876 MRPL34Q9BQ48 92 aaKnown RBP0.5□□□□□ -2.33
CCDC38-208ENST00000549876 EIF2AK4Q9P2K8 1649 aaKnown RBP0.49□□□□□ -2.33
CCDC38-208ENST00000549876 ADAMTS12P58397 1594 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 SPINK4O60575 86 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 KRTAP2-3P0C7H8 128 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 SPRR1BP22528 89 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 SPRR1AP35321 89 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 KRTAP2-4Q9BYR9 128 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 KRTAP2-1Q9BYU5 128 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 TNCP24821 2201 aa0.49□□□□□ -2.33
CCDC38-208ENST00000549876 F8P00451 2351 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 PARP4Q9UKK3 1724 aaKnown RBP0.48□□□□□ -2.33
CCDC38-208ENST00000549876 SMR3AQ99954 134 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 NHSQ6T4R5 1651 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 NESP48681 1621 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 MROH1Q8NDA8 1641 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 EFCAB5A4FU69 1503 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 LMTK2Q8IWU2 1503 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 ABCA12Q86UK0 2595 aa0.48□□□□□ -2.33
CCDC38-208ENST00000549876 ITSN1Q15811 1721 aa0.47□□□□□ -2.33
CCDC38-208ENST00000549876 CELSR2Q9HCU4 2923 aa0.47□□□□□ -2.33
CCDC38-208ENST00000549876 SPINK1P00995 79 aa0.47□□□□□ -2.33
CCDC38-208ENST00000549876 APCP25054 2843 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 WIZO95785 1651 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 TNRC6CQ9HCJ0 1690 aaKnown RBP0.46□□□□□ -2.34
CCDC38-208ENST00000549876 ABCA9Q8IUA7 1624 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 BDP1A6H8Y1 2624 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 CDC42BPGQ6DT37 1551 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 INO80Q9ULG1 1556 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-208ENST00000549876 POLQO75417 2590 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 H3BVH4 76 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 NDUFA4O00483 81 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 ATXN8Q156A1 80 aa0.46□□□□□ -2.34
CCDC38-208ENST00000549876 DEFB109BQ30KR1 87 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms