RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 IFI27P40305 119 aaPredicted RBP4.38□□□□□ -1.71
NPAS3-207ENST00000549770 HERVK_113P61574 105 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 Q6JHZ5 121 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 C6orf223Q8N319 242 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
NPAS3-207ENST00000549770 IGKV3D-20A0A0C4DH25 116 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 SH2D1AO60880 128 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 RNASE3P12724 160 aaKnown RBP4.37□□□□□ -1.71
NPAS3-207ENST00000549770 CRIP1P50238 77 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 LYPD5Q6UWN5 251 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
NPAS3-207ENST00000549770 MAPKAPK5-AS1Q8N8E1 139 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
NPAS3-207ENST00000549770 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.36□□□□□ -1.71
NPAS3-207ENST00000549770 VPREB1P12018 145 aa4.36□□□□□ -1.71
NPAS3-207ENST00000549770 GATA1P15976 413 aaPredicted RBP4.36□□□□□ -1.71
NPAS3-207ENST00000549770 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
NPAS3-207ENST00000549770 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
NPAS3-207ENST00000549770 ZNF575Q86XF7 245 aa4.36□□□□□ -1.71
NPAS3-207ENST00000549770 WFDC10BQ8IUB3 73 aa4.36□□□□□ -1.71
NPAS3-207ENST00000549770 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
NPAS3-207ENST00000549770 D6R8Y8 96 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 USP17L23D6RBM5 183 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 K7EMI3 77 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 LST1O00453 97 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 IGHV3-30P01768 117 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 CFC1P0CG37 223 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 IGHV3-30-5P0DP03 117 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 LINC00315P59091 139 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 SMCR5Q8TEV8 140 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
NPAS3-207ENST00000549770 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
NPAS3-207ENST00000549770 M0R381 172 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 NDUFC1O43677 76 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 INAFM2P0DMQ5 153 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
NPAS3-207ENST00000549770 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 Q9UF83 564 aa4.34□□□□□ -1.71
NPAS3-207ENST00000549770 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
NPAS3-207ENST00000549770 PCLOQ9Y6V0 5065 aa4.34□□□□□ -1.72
NPAS3-207ENST00000549770 ZNF815PA8K554 130 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 H7C423 109 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
NPAS3-207ENST00000549770 RHOHQ15669 191 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
NPAS3-207ENST00000549770 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 COX8CQ7Z4L0 72 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
NPAS3-207ENST00000549770 PHLDA3Q9Y5J5 127 aa4.33□□□□□ -1.72
NPAS3-207ENST00000549770 FAT1Q14517 4588 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 TRBV6-4A0A1B0GX49 114 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 C16orf90A8MZG2 172 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 PRSS1P07477 247 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
NPAS3-207ENST00000549770 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
NPAS3-207ENST00000549770 SDHAF1A6NFY7 115 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 IBA57-AS1B1ANH7 110 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 H7BZZ5 65 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 COX6CP09669 75 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 DNAH10OSP0CZ25 163 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 IGHV3-30-3P0DP02 117 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 Q6ZRN7 208 aaPredicted RBP4.31□□□□□ -1.72
NPAS3-207ENST00000549770 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 Q9HAA7 133 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 MSRB1Q9NZV6 116 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
NPAS3-207ENST00000549770 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
NPAS3-207ENST00000549770 IGHV1-58A0A0C4DH39 117 aa4.3□□□□□ -1.72
NPAS3-207ENST00000549770 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 CKS2P33552 79 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 LELP1Q5T871 98 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
NPAS3-207ENST00000549770 C11orf86A6NJI1 115 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 CCKP06307 115 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 LAGE3Q14657 143 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
NPAS3-207ENST00000549770 AMELXQ99217 191 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
NPAS3-207ENST00000549770 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
NPAS3-207ENST00000549770 A0A087WTM6 91 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 PSCAO43653 123 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 MGPP08493 103 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 LGALS3P17931 250 aaKnown RBP4.27□□□□□ -1.73
NPAS3-207ENST00000549770 XCL1P47992 114 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms