RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 M0R143 59 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 PSCAO43653 123 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 XCL1P47992 114 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 Q6ZRN7 208 aaPredicted RBP2.36□□□□□ -2.03
APAF1-208ENST00000549007 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 LINC00614P0C842 121 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 C10orf126Q8N4M7 172 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 LINC00526Q96FQ7 95 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 SNHG12Q9BXW3 62 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 CDC42SE2Q9NRR3 84 aa2.36□□□□□ -2.03
APAF1-208ENST00000549007 CCL25O15444 150 aa2.35□□□□□ -2.03
APAF1-208ENST00000549007 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
APAF1-208ENST00000549007 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
APAF1-208ENST00000549007 ZNF706Q9Y5V0 76 aaPredicted RBP2.35□□□□□ -2.03
APAF1-208ENST00000549007 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
APAF1-208ENST00000549007 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
APAF1-208ENST00000549007 CAMK2N2Q96S95 79 aa2.35□□□□□ -2.03
APAF1-208ENST00000549007 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 IGIPA6NJ69 53 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 LINC00337Q8N6G1 96 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 SND1-IT1Q9HBX3 110 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 SPANXA1Q9NS26 97 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 PRR34Q9NV39 138 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 HBDP02042 147 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 COX6A2Q02221 97 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 TMEM141Q96I45 108 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 PMCHL2Q9BQD1 86 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
APAF1-208ENST00000549007 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
APAF1-208ENST00000549007 PKD1P98161 4303 aa2.34□□□□□ -2.04
APAF1-208ENST00000549007 ZNF25P17030 456 aaPredicted RBP2.34□□□□□ -2.04
APAF1-208ENST00000549007 MIAQ16674 131 aa2.34□□□□□ -2.04
APAF1-208ENST00000549007 VAMP8Q9BV40 100 aa2.34□□□□□ -2.04
APAF1-208ENST00000549007 A0A087WTM6 91 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 LINC01546A6NGU7 62 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 CD164Q04900 197 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 TIMM21Q9BVV7 248 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 HECTD4Q9Y4D8 3996 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 PSPHP1O15172 72 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 DLEU1O43261 78 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 HAMPP81172 84 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 SS18Q15532 418 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 CHCHD1Q96BP2 118 aaKnown RBP2.33□□□□□ -2.04
APAF1-208ENST00000549007 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 C20orf202A1L168 122 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.33□□□□□ -2.04
APAF1-208ENST00000549007 MRPS36P82909 103 aaKnown RBP2.33□□□□□ -2.04
APAF1-208ENST00000549007 RMI2Q96E14 147 aa2.33□□□□□ -2.04
APAF1-208ENST00000549007 K7EMI3 77 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 LEPROTL1O95214 131 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 UBE2D1P51668 147 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 COL5A1-AS1Q5SY13 56 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 IFI27L1Q96BM0 104 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 AMELXQ99217 191 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 CST9LQ9H4G1 147 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 UQCR10Q9UDW1 63 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 LRP1BQ9NZR2 4599 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 SPINK8P0C7L1 97 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 CDKN2A-AS1Q9UH64 79 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 K7EP13 123 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 COX7A2LO14548 114 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 C3orf79P0CE67 100 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 IGLC3P0DOY3 106 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 KRTDAPP60985 99 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 SMAGPQ0VAQ4 97 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 SPATA45Q537H7 98 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 Q8N814 137 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
APAF1-208ENST00000549007 TOMM7Q9P0U1 55 aa2.32□□□□□ -2.04
APAF1-208ENST00000549007 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 IGLV4-69A0A075B6H9 119 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 G0S2P27469 103 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 ORAOV1Q8WV07 137 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 PSMB2P49721 201 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 C2orf82Q6UX34 121 aa2.31□□□□□ -2.04
APAF1-208ENST00000549007 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 C16orf90A8MZG2 172 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 C4orf26Q17RF5 130 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 ATOH7Q8N100 152 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms