RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
RAPGEF3-218ENST00000548919 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
RAPGEF3-218ENST00000548919 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
RAPGEF3-218ENST00000548919 DAD1P61803 113 aa9.58□□□□□ -0.88
RAPGEF3-218ENST00000548919 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
RAPGEF3-218ENST00000548919 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
RAPGEF3-218ENST00000548919 M0R2N4 97 aa9.57□□□□□ -0.88
RAPGEF3-218ENST00000548919 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
RAPGEF3-218ENST00000548919 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
RAPGEF3-218ENST00000548919 OTOGQ6ZRI0 2925 aa9.55□□□□□ -0.88
RAPGEF3-218ENST00000548919 J3KT08 172 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 GHRHP01286 108 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 Q6ZQT0 140 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 PKD1L1Q8TDX9 2849 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
RAPGEF3-218ENST00000548919 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
RAPGEF3-218ENST00000548919 ATRQ13535 2644 aa9.53□□□□□ -0.88
RAPGEF3-218ENST00000548919 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
RAPGEF3-218ENST00000548919 Q6ZQY7 126 aa9.53□□□□□ -0.88
RAPGEF3-218ENST00000548919 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
RAPGEF3-218ENST00000548919 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
RAPGEF3-218ENST00000548919 ATP5EP2Q5VTU8 51 aa9.52□□□□□ -0.89
RAPGEF3-218ENST00000548919 FAM19A5Q7Z5A7 132 aaPredicted RBP9.52□□□□□ -0.89
RAPGEF3-218ENST00000548919 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
RAPGEF3-218ENST00000548919 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
RAPGEF3-218ENST00000548919 Q8NAQ8 132 aa9.51□□□□□ -0.89
RAPGEF3-218ENST00000548919 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
RAPGEF3-218ENST00000548919 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
RAPGEF3-218ENST00000548919 LELP1Q5T871 98 aa9.5□□□□□ -0.89
RAPGEF3-218ENST00000548919 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
RAPGEF3-218ENST00000548919 TMEM258P61165 79 aa9.49□□□□□ -0.89
RAPGEF3-218ENST00000548919 C9orf66Q5T8R8 295 aa9.49□□□□□ -0.89
RAPGEF3-218ENST00000548919 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
RAPGEF3-218ENST00000548919 APOC4P55056 127 aa9.49□□□□□ -0.89
RAPGEF3-218ENST00000548919 HAMPP81172 84 aa9.49□□□□□ -0.89
RAPGEF3-218ENST00000548919 HECTD1Q9ULT8 2610 aa9.48□□□□□ -0.89
RAPGEF3-218ENST00000548919 PRR34Q9NV39 138 aa9.48□□□□□ -0.89
RAPGEF3-218ENST00000548919 TEP1Q99973 2627 aaKnown RBP9.48□□□□□ -0.89
RAPGEF3-218ENST00000548919 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
RAPGEF3-218ENST00000548919 OXTP01178 125 aa9.47□□□□□ -0.89
RAPGEF3-218ENST00000548919 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
RAPGEF3-218ENST00000548919 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.89
RAPGEF3-218ENST00000548919 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.89
RAPGEF3-218ENST00000548919 Q6ZVQ6 151 aa9.46□□□□□ -0.89
RAPGEF3-218ENST00000548919 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.89
RAPGEF3-218ENST00000548919 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
RAPGEF3-218ENST00000548919 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
RAPGEF3-218ENST00000548919 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
RAPGEF3-218ENST00000548919 MIFP14174 115 aa9.45□□□□□ -0.9
RAPGEF3-218ENST00000548919 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
RAPGEF3-218ENST00000548919 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
RAPGEF3-218ENST00000548919 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
RAPGEF3-218ENST00000548919 MUC7Q8TAX7 377 aa9.43□□□□□ -0.9
RAPGEF3-218ENST00000548919 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF3-218ENST00000548919 WFDC10BQ8IUB3 73 aa9.42□□□□□ -0.9
RAPGEF3-218ENST00000548919 COX7BP24311 80 aa9.41□□□□□ -0.9
RAPGEF3-218ENST00000548919 CAMK2N2Q96S95 79 aa9.41□□□□□ -0.9
RAPGEF3-218ENST00000548919 INAFM1C9JVW0 142 aa9.4□□□□□ -0.91
RAPGEF3-218ENST00000548919 VPREB1P12018 145 aa9.39□□□□□ -0.91
RAPGEF3-218ENST00000548919 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
RAPGEF3-218ENST00000548919 Q6ZRU5 148 aa9.38□□□□□ -0.91
RAPGEF3-218ENST00000548919 ANK2Q01484 3957 aa9.38□□□□□ -0.91
RAPGEF3-218ENST00000548919 TRBV7-4A0A0J9YYF1 115 aa9.37□□□□□ -0.91
RAPGEF3-218ENST00000548919 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
RAPGEF3-218ENST00000548919 RETNQ9HD89 108 aa9.37□□□□□ -0.91
RAPGEF3-218ENST00000548919 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
RAPGEF3-218ENST00000548919 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
RAPGEF3-218ENST00000548919 PDE6GP18545 87 aa9.36□□□□□ -0.91
RAPGEF3-218ENST00000548919 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
RAPGEF3-218ENST00000548919 CXCL6P80162 114 aa9.35□□□□□ -0.91
RAPGEF3-218ENST00000548919 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
RAPGEF3-218ENST00000548919 KPRPQ5T749 579 aaPredicted RBP9.35□□□□□ -0.91
RAPGEF3-218ENST00000548919 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
RAPGEF3-218ENST00000548919 H7BZZ5 65 aa9.34□□□□□ -0.91
RAPGEF3-218ENST00000548919 C4orf26Q17RF5 130 aa9.34□□□□□ -0.91
RAPGEF3-218ENST00000548919 M0R378 163 aa9.33□□□□□ -0.92
RAPGEF3-218ENST00000548919 H3BQ85 93 aa9.33□□□□□ -0.92
RAPGEF3-218ENST00000548919 J3QKU1 62 aa9.33□□□□□ -0.92
RAPGEF3-218ENST00000548919 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
RAPGEF3-218ENST00000548919 RMI2Q96E14 147 aa9.33□□□□□ -0.92
RAPGEF3-218ENST00000548919 NDUFC2-KCTD14E9PQ53 114 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 Q6ZRP5 223 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 Q8N9L7 120 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 Q6ZTC4 211 aa9.32□□□□□ -0.92
RAPGEF3-218ENST00000548919 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
RAPGEF3-218ENST00000548919 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
RAPGEF3-218ENST00000548919 Q5XG85 94 aa9.3□□□□□ -0.92
RAPGEF3-218ENST00000548919 ESRGQ1W209 222 aa9.29□□□□□ -0.92
RAPGEF3-218ENST00000548919 BCE1O60756 84 aa9.29□□□□□ -0.92
RAPGEF3-218ENST00000548919 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
RAPGEF3-218ENST00000548919 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
RAPGEF3-218ENST00000548919 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
RAPGEF3-218ENST00000548919 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
RAPGEF3-218ENST00000548919 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms