RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HIST2H2BEQ16778 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-216ENST00000548379 AKR1C8PQ5T2L2 129 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 SPINK6Q6UWN8 80 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 OR10D4PQ8NGN7 298 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BHQ93079 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 FAM167A-AS1Q96KT0 104 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 LINC01600Q96MT4 127 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BNQ99877 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BMQ99879 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 MIEN1Q9BRT3 115 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 LINC00474Q9P2X8 69 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 V9GYH0 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 TRBV25-1A0A075B6N4 114 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 TCRAP04437 139 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 RNASE3P12724 160 aaKnown RBP1.77□□□□□ -2.13
PTCH1-216ENST00000548379 DEFA3P59666 94 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 CNBPP62633 177 aaKnown RBP1.77□□□□□ -2.13
PTCH1-216ENST00000548379 ZNF56Q15929 161 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 ENHOQ6UWT2 76 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 LINC00269Q8N2A0 174 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 C5orf17Q8NAS9 161 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 DERL1Q9BUN8 251 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 TMEM167BQ9NRX6 74 aa1.77□□□□□ -2.13
PTCH1-216ENST00000548379 FAT1Q14517 4588 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 IGHV1-24A0A0C4DH33 117 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 LOC105371267A0A1B0GV96 52 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 H3BVH4 76 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 LYRM1O43325 122 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
PTCH1-216ENST00000548379 NDUFC2O95298 119 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 ARMS2P0C7Q2 107 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 RAB5CP51148 216 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 ZNF80P51504 273 aaPredicted RBP1.76□□□□□ -2.13
PTCH1-216ENST00000548379 RAB4BP61018 213 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 UBE2D3P61077 147 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 UBE2G1P62253 170 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 HIST1H4AP62805 103 aaKnown RBP1.76□□□□□ -2.13
PTCH1-216ENST00000548379 UBE2D2P62837 147 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 CIRBPQ14011 172 aaKnown RBP1.76□□□□□ -2.13
PTCH1-216ENST00000548379 SPANXN1Q5VSR9 72 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 CLPSL2Q6UWE3 100 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 SPACA4Q8TDM5 124 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 DNAJC30Q96LL9 226 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 CCDC32Q9BV29 185 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 EPDR1Q9UM22 224 aa1.76□□□□□ -2.13
PTCH1-216ENST00000548379 TMSB15BA0A087X1C1 80 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 TRBV6-1A0A0K0K1D8 114 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 SDHAF1A6NFY7 115 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 G3V3Q6 166 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 IL7P13232 177 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 UBE2D1P51668 147 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 COX6A2Q02221 97 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 RHEBQ15382 184 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 AQP10Q96PS8 301 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 ZNF471Q9BX82 626 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-216ENST00000548379 SMIM3Q9BZL3 60 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 ZFP30Q9Y2G7 519 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 HSPB11Q9Y547 144 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 ARL2-SNX15V9GYD0 113 aa1.75□□□□□ -2.13
PTCH1-216ENST00000548379 TRAV1-1A0A0B4J248 108 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 A0A1W2PRE2 83 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 C11orf86A6NJI1 115 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 SIX6O95475 246 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 MT-ND6P03923 174 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 MGPP08493 103 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 GCHFRP30047 84 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 SERF2P84101 59 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 IQCJQ1A5X6 159 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 LCA10Q71F78 164 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 TSKUQ8WUA8 353 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 PPP1R1CQ8WVI7 109 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 IMMP2LQ96T52 175 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 TCEAL7Q9BRU2 100 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 IMUPQ9GZP8 106 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 MUC4Q99102 2169 aa1.74□□□□□ -2.13
PTCH1-216ENST00000548379 MAP1LC3B2A6NCE7 125 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 H3BT86 120 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 MPC2O95563 127 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 AKR1C3P42330 323 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 RPL28P46779 137 aaKnown RBP1.73□□□□□ -2.13
PTCH1-216ENST00000548379 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 EIF5AP63241 154 aaKnown RBP1.73□□□□□ -2.13
PTCH1-216ENST00000548379 LYRM7Q5U5X0 104 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 Q86TA4 180 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 DIRC1Q969H9 104 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 CARD19Q96LW7 228 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 PSMG3Q9BT73 122 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-216ENST00000548379 MAP1LC3BQ9GZQ8 125 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 BATF3Q9NR55 127 aa1.73□□□□□ -2.13
PTCH1-216ENST00000548379 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms