RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 CORTO00230 105 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 CCL25O15444 150 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 BCE1O60756 84 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 S100A8P05109 93 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 SMIM6P0DI80 62 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 MT1HL1P0DM35 61 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 ADCYAP1P18509 176 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 CBLN1P23435 193 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 TPPP2P59282 170 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 ELOF1P60002 83 aaKnown RBP0.21□□□□□ -2.38
CEP290-204ENST00000547926 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
CEP290-204ENST00000547926 CCL8P80075 99 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 OCIAD2Q56VL3 154 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 XAF1Q6GPH4 301 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 TEX261Q6UWH6 196 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 LYPD5Q6UWN5 251 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 Q6ZUT4 128 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 C5orf38Q86SI9 138 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 GKN2Q86XP6 184 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 C8orf59Q8N0T1 100 aaPredicted RBP0.21□□□□□ -2.38
CEP290-204ENST00000547926 FAM19A2Q8N3H0 131 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 TEX29Q8N6K0 151 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 Q8TAT8 98 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 TSKUQ8WUA8 353 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 BRK1Q8WUW1 75 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 SPTSSAQ969W0 71 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 AMELXQ99217 191 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 AMELYQ99218 206 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 SMIM3Q9BZL3 60 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 COA4Q9NYJ1 87 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 GNG8Q9UK08 70 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 NOP16Q9Y3C1 178 aaKnown RBP0.21□□□□□ -2.38
CEP290-204ENST00000547926 MYH10P35580 1976 aa0.21□□□□□ -2.38
CEP290-204ENST00000547926 ROCK2O75116 1388 aaKnown RBP0.21□□□□□ -2.38
CEP290-204ENST00000547926 TRAV23DV6A0A075B6W5 121 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 TRAV30A0A087WSZ9 112 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 TRBV7-1A0A0A6YYK4 115 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 PVALEFA0A1B0GWK0 134 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 A6NIN4 97 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 LINC00587B1AMM8 73 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 TMEM262E9PQX1 116 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 APOC4-APOC2K7ER74 178 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 EDF1O60869 148 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 SIX6O95475 246 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 IGLV3-1P01715 115 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 APOC2P02655 101 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 CCKP06307 115 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 PIRTP0C851 137 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 HMGA1P17096 107 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 RBP2P50120 134 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 DEFA1P59665 94 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 DEFA3P59666 94 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 PPP3R1P63098 170 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 DCDP81605 110 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 KLKP1Q107X0 134 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 C9orf116Q5BN46 136 aaPredicted RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 MEIG1Q5JSS6 88 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 RPL7L1Q6DKI1 246 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 SLC48A1Q6P1K1 146 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 UNQ5815/PRO19632Q6UWF5 114 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 Q6ZS92 163 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 ZCCHC23Q6ZST2 131 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SBSPONQ8IVN8 264 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 ZC2HC1AQ96GY0 325 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 CDC42SE1Q9NRR8 79 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SCN3BQ9NY72 215 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 BET1LQ9NYM9 111 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 MRPL36Q9P0J6 103 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 LSM2Q9Y333 95 aaKnown RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 PPLO60437 1756 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SPEF2Q9C093 1822 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.2□□□□□ -2.38
CEP290-204ENST00000547926 A0A096LNT2 108 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 FAM236AA0A1B0GUQ0 79 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 FAM236BA0A1B0GV22 79 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 A0A1B0GV90 55 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 C20orf202A1L168 122 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 FAM24AA6NFZ4 105 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 B4DSR2 109 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 NDUFC1O43677 76 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SNCGO76070 127 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 MPC2O95563 127 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 COX6CP09669 75 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 LINC00032P0C843 101 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 CAV3P56539 151 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 KRTDAPP60985 99 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 UBE2G1P62253 170 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 HAMPP81172 84 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 ZNF56Q15929 161 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 CLLU1Q5K131 121 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 FAM74A4Q5TZK3 123 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 COMMD6Q7Z4G1 85 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SNX29P2Q8IUI4 249 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 CLECL1Q8IZS7 167 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 Q8N8P6 123 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 NIT2Q9NQR4 276 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 NDUFA12Q9UI09 145 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 AP4S1Q9Y587 144 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 LENEPQ9Y5L5 61 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 SCN8AQ9UQD0 1980 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms