RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 COX17Q14061 63 aa11.73□□□□□ -0.53
SSH1-207ENST00000547862 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
SSH1-207ENST00000547862 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
SSH1-207ENST00000547862 URB1-AS1Q96HZ7 61 aa11.73□□□□□ -0.53
SSH1-207ENST00000547862 LINC00158P58513 81 aa11.72□□□□□ -0.53
SSH1-207ENST00000547862 COMMD7Q86VX2 200 aa11.72□□□□□ -0.53
SSH1-207ENST00000547862 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
SSH1-207ENST00000547862 MUC17Q685J3 4493 aa11.7□□□□□ -0.54
SSH1-207ENST00000547862 LINC00614P0C842 121 aa11.7□□□□□ -0.54
SSH1-207ENST00000547862 TRAPPC1Q9Y5R8 145 aa11.7□□□□□ -0.54
SSH1-207ENST00000547862 IFITM2Q01629 132 aa11.69□□□□□ -0.54
SSH1-207ENST00000547862 LCE2AQ5TA79 106 aaPredicted RBP11.69□□□□□ -0.54
SSH1-207ENST00000547862 PPDPFQ9H3Y8 114 aa11.69□□□□□ -0.54
SSH1-207ENST00000547862 RHEBQ15382 184 aa11.67□□□□□ -0.54
SSH1-207ENST00000547862 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
SSH1-207ENST00000547862 SPRR4Q96PI1 79 aa11.67□□□□□ -0.54
SSH1-207ENST00000547862 CHTOPQ9Y3Y2 248 aaKnown RBP11.67□□□□□ -0.54
SSH1-207ENST00000547862 FAT4Q6V0I7 4981 aa11.67□□□□□ -0.54
SSH1-207ENST00000547862 NCR3O14931 201 aa11.66□□□□□ -0.54
SSH1-207ENST00000547862 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
SSH1-207ENST00000547862 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
SSH1-207ENST00000547862 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
SSH1-207ENST00000547862 DAND5Q8N907 189 aa11.63□□□□□ -0.55
SSH1-207ENST00000547862 ZNF706Q9Y5V0 76 aaPredicted RBP11.63□□□□□ -0.55
SSH1-207ENST00000547862 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
SSH1-207ENST00000547862 BOD1L2Q8IYS8 172 aa11.62□□□□□ -0.55
SSH1-207ENST00000547862 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
SSH1-207ENST00000547862 PRYO14603 147 aa11.61□□□□□ -0.55
SSH1-207ENST00000547862 SPAG11AQ6PDA7 123 aa11.61□□□□□ -0.55
SSH1-207ENST00000547862 Q8NBF4 154 aa11.61□□□□□ -0.55
SSH1-207ENST00000547862 CTAG1AP78358 180 aa11.6□□□□□ -0.55
SSH1-207ENST00000547862 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
SSH1-207ENST00000547862 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.56
SSH1-207ENST00000547862 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
SSH1-207ENST00000547862 SMCR5Q8TEV8 140 aa11.57□□□□□ -0.56
SSH1-207ENST00000547862 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
SSH1-207ENST00000547862 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
SSH1-207ENST00000547862 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
SSH1-207ENST00000547862 TRBV10-3A0A0K0K1G6 114 aa11.54□□□□□ -0.56
SSH1-207ENST00000547862 H0Y8G0 127 aa11.54□□□□□ -0.56
SSH1-207ENST00000547862 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
SSH1-207ENST00000547862 APOC3P02656 99 aa11.53□□□□□ -0.56
SSH1-207ENST00000547862 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.57
SSH1-207ENST00000547862 NDUFA12Q9UI09 145 aa11.52□□□□□ -0.57
SSH1-207ENST00000547862 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
SSH1-207ENST00000547862 SPRR1AP35321 89 aa11.51□□□□□ -0.57
SSH1-207ENST00000547862 MOBPQ13875 183 aa11.51□□□□□ -0.57
SSH1-207ENST00000547862 KRTAP13-3Q3SY46 172 aa11.51□□□□□ -0.57
SSH1-207ENST00000547862 KCNQ1DNQ9H478 68 aa11.51□□□□□ -0.57
SSH1-207ENST00000547862 HERV-K104P63124 156 aa11.5□□□□□ -0.57
SSH1-207ENST00000547862 CHCHD1Q96BP2 118 aaKnown RBP11.5□□□□□ -0.57
SSH1-207ENST00000547862 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
SSH1-207ENST00000547862 S100A12P80511 92 aa11.48□□□□□ -0.57
SSH1-207ENST00000547862 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
SSH1-207ENST00000547862 MYMXA0A1B0GTQ4 84 aa11.47□□□□□ -0.57
SSH1-207ENST00000547862 SPINK1P00995 79 aa11.47□□□□□ -0.57
SSH1-207ENST00000547862 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
SSH1-207ENST00000547862 ERC2-IT1O76042 136 aa11.46□□□□□ -0.57
SSH1-207ENST00000547862 SNAPINO95295 136 aa11.46□□□□□ -0.57
SSH1-207ENST00000547862 TSPEAR-AS2P59090 65 aa11.46□□□□□ -0.57
SSH1-207ENST00000547862 NDUFA5Q16718 116 aa11.46□□□□□ -0.57
SSH1-207ENST00000547862 LINC00483Q53H64 154 aa11.46□□□□□ -0.57
SSH1-207ENST00000547862 KRTAP9-6A0A140TA67 174 aa11.45□□□□□ -0.58
SSH1-207ENST00000547862 B5MCH6 92 aa11.45□□□□□ -0.58
SSH1-207ENST00000547862 HSBP1O75506 76 aa11.45□□□□□ -0.58
SSH1-207ENST00000547862 SVBPQ8N300 66 aa11.45□□□□□ -0.58
SSH1-207ENST00000547862 LINC00587B1AMM8 73 aa11.44□□□□□ -0.58
SSH1-207ENST00000547862 DDTP30046 118 aa11.44□□□□□ -0.58
SSH1-207ENST00000547862 ASB16-AS1Q495Z4 193 aa11.43□□□□□ -0.58
SSH1-207ENST00000547862 Q9BRP9 147 aa11.41□□□□□ -0.58
SSH1-207ENST00000547862 KRTAP4-1Q9BYQ7 146 aa11.41□□□□□ -0.58
SSH1-207ENST00000547862 LEPROTO15243 131 aa11.4□□□□□ -0.58
SSH1-207ENST00000547862 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.58
SSH1-207ENST00000547862 Q8N377 158 aa11.4□□□□□ -0.58
SSH1-207ENST00000547862 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
SSH1-207ENST00000547862 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
SSH1-207ENST00000547862 LINC01547P58512 204 aaPredicted RBP11.39□□□□□ -0.59
SSH1-207ENST00000547862 SEC61BP60468 96 aaKnown RBP11.39□□□□□ -0.59
SSH1-207ENST00000547862 NPC2P61916 151 aa11.38□□□□□ -0.59
SSH1-207ENST00000547862 S100A7L2Q5SY68 101 aa11.38□□□□□ -0.59
SSH1-207ENST00000547862 Q6ZRX8 168 aa11.38□□□□□ -0.59
SSH1-207ENST00000547862 SPANXB1Q9NS25 103 aaPredicted RBP11.38□□□□□ -0.59
SSH1-207ENST00000547862 TRBV10-2A0A0K0K1G8 114 aa11.36□□□□□ -0.59
SSH1-207ENST00000547862 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
SSH1-207ENST00000547862 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
SSH1-207ENST00000547862 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
SSH1-207ENST00000547862 J3QQQ9 107 aa11.35□□□□□ -0.59
SSH1-207ENST00000547862 HERVK_113P61574 105 aa11.35□□□□□ -0.59
SSH1-207ENST00000547862 TRAV23DV6A0A075B6W5 121 aa11.34□□□□□ -0.59
SSH1-207ENST00000547862 SLC25A20O43772 301 aa11.34□□□□□ -0.59
SSH1-207ENST00000547862 LGALS3P17931 250 aaKnown RBP11.34□□□□□ -0.59
SSH1-207ENST00000547862 PLNP26678 52 aa11.34□□□□□ -0.59
SSH1-207ENST00000547862 SERF1AO75920 110 aa11.33□□□□□ -0.6
SSH1-207ENST00000547862 RPS29P62273 56 aaKnown RBP11.33□□□□□ -0.6
SSH1-207ENST00000547862 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
SSH1-207ENST00000547862 FABP4P15090 132 aa11.32□□□□□ -0.6
SSH1-207ENST00000547862 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
SSH1-207ENST00000547862 DPM2O94777 84 aa11.31□□□□□ -0.6
SSH1-207ENST00000547862 TRGC2P03986 189 aa11.31□□□□□ -0.6
SSH1-207ENST00000547862 LINC00310P59036 64 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms