RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 IFITM1P13164 125 aa8.97□□□□□ -0.97
PTPRB-205ENST00000547715 SPANXN1Q5VSR9 72 aa8.97□□□□□ -0.97
PTPRB-205ENST00000547715 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
PTPRB-205ENST00000547715 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
PTPRB-205ENST00000547715 TMEM243Q9BU79 118 aa8.96□□□□□ -0.98
PTPRB-205ENST00000547715 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
PTPRB-205ENST00000547715 K7ERJ3 54 aa8.95□□□□□ -0.98
PTPRB-205ENST00000547715 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
PTPRB-205ENST00000547715 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
PTPRB-205ENST00000547715 IGKV2D-26A0A0A0MRZ7 120 aa8.94□□□□□ -0.98
PTPRB-205ENST00000547715 FAM240AA0A1B0GVK7 77 aa8.94□□□□□ -0.98
PTPRB-205ENST00000547715 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
PTPRB-205ENST00000547715 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
PTPRB-205ENST00000547715 A0A0U1RQV1 116 aa8.93□□□□□ -0.98
PTPRB-205ENST00000547715 KRTAP9-6A0A140TA67 174 aa8.93□□□□□ -0.98
PTPRB-205ENST00000547715 UBE2L6O14933 153 aa8.93□□□□□ -0.98
PTPRB-205ENST00000547715 RPL13AP40429 203 aaKnown RBP8.93□□□□□ -0.98
PTPRB-205ENST00000547715 M0QY20 66 aa8.92□□□□□ -0.98
PTPRB-205ENST00000547715 MGPP08493 103 aa8.92□□□□□ -0.98
PTPRB-205ENST00000547715 PSMB2P49721 201 aa8.92□□□□□ -0.98
PTPRB-205ENST00000547715 TPPP3Q9BW30 176 aa8.92□□□□□ -0.98
PTPRB-205ENST00000547715 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
PTPRB-205ENST00000547715 RPL32P62910 135 aaKnown RBP8.91□□□□□ -0.98
PTPRB-205ENST00000547715 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
PTPRB-205ENST00000547715 B5MCH6 92 aa8.9□□□□□ -0.98
PTPRB-205ENST00000547715 ACYP1P07311 99 aa8.9□□□□□ -0.98
PTPRB-205ENST00000547715 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.98
PTPRB-205ENST00000547715 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
PTPRB-205ENST00000547715 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
PTPRB-205ENST00000547715 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
PTPRB-205ENST00000547715 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 PRO1854Q9UHT4 67 aa8.89□□□□□ -0.99
PTPRB-205ENST00000547715 TRAV26-2A0A0B4J265 109 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
PTPRB-205ENST00000547715 PRR26Q8N8Z3 221 aa8.87□□□□□ -0.99
PTPRB-205ENST00000547715 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
PTPRB-205ENST00000547715 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
PTPRB-205ENST00000547715 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 H3BT86 120 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 SLC25A20O43772 301 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 HERV-K104P63124 156 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 SMIM2Q9BVW6 85 aa8.86□□□□□ -0.99
PTPRB-205ENST00000547715 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
PTPRB-205ENST00000547715 PRR4Q16378 134 aa8.84□□□□□ -0.99
PTPRB-205ENST00000547715 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
PTPRB-205ENST00000547715 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 A0A1B0GX51 115 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 C11orf86A6NJI1 115 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 TCL1BO95988 128 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 COX6CP09669 75 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 NRACQ8N912 160 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 TMEM101Q96IK0 257 aa8.83□□□□□ -1
PTPRB-205ENST00000547715 XCL1P47992 114 aa8.82□□□□□ -1
PTPRB-205ENST00000547715 RPS28P62857 69 aaKnown RBP8.82□□□□□ -1
PTPRB-205ENST00000547715 SYCNQ0VAF6 134 aa8.82□□□□□ -1
PTPRB-205ENST00000547715 C5orf47Q569G3 176 aa8.82□□□□□ -1
PTPRB-205ENST00000547715 C1orf137Q5JT78 98 aa8.82□□□□□ -1
PTPRB-205ENST00000547715 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
PTPRB-205ENST00000547715 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 A0A1W2PNN7 141 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 SMKR1H3BMG3 65 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
PTPRB-205ENST00000547715 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 CFC1BP0CG36 223 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 CFC1P0CG37 223 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 SUMO2P61956 95 aaKnown RBP8.8□□□□□ -1
PTPRB-205ENST00000547715 MEIG1Q5JSS6 88 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 PLEKHB2Q96CS7 222 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 TIMM17AQ99595 171 aa8.8□□□□□ -1
PTPRB-205ENST00000547715 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
PTPRB-205ENST00000547715 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
PTPRB-205ENST00000547715 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
PTPRB-205ENST00000547715 DIRC1Q969H9 104 aa8.79□□□□□ -1
PTPRB-205ENST00000547715 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
PTPRB-205ENST00000547715 C9JAW5 83 aa8.78□□□□□ -1
PTPRB-205ENST00000547715 PMVKQ15126 192 aa8.78□□□□□ -1
PTPRB-205ENST00000547715 UQCRQO14949 82 aa8.77□□□□□ -1.01
PTPRB-205ENST00000547715 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
PTPRB-205ENST00000547715 CXCL5P42830 114 aa8.77□□□□□ -1.01
PTPRB-205ENST00000547715 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
PTPRB-205ENST00000547715 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
PTPRB-205ENST00000547715 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
PTPRB-205ENST00000547715 COPS9Q8WXC6 57 aa8.77□□□□□ -1.01
PTPRB-205ENST00000547715 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
PTPRB-205ENST00000547715 H7C423 109 aa8.76□□□□□ -1.01
PTPRB-205ENST00000547715 J3KT08 172 aa8.76□□□□□ -1.01
PTPRB-205ENST00000547715 IGLV7-43P04211 117 aa8.76□□□□□ -1.01
PTPRB-205ENST00000547715 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms