RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
RBFOX1-207ENST00000547338 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
RBFOX1-207ENST00000547338 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
RBFOX1-207ENST00000547338 CRPP02741 224 aa11.6□□□□□ -0.55
RBFOX1-207ENST00000547338 CCL18P55774 89 aa11.6□□□□□ -0.55
RBFOX1-207ENST00000547338 MTURNQ8N3F0 131 aa11.6□□□□□ -0.55
RBFOX1-207ENST00000547338 MALP21145 153 aa11.6□□□□□ -0.55
RBFOX1-207ENST00000547338 KRTAP1-5Q9BYS1 174 aa11.6□□□□□ -0.55
RBFOX1-207ENST00000547338 NBDYA0A0U1RRE5 68 aa11.59□□□□□ -0.55
RBFOX1-207ENST00000547338 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
RBFOX1-207ENST00000547338 TRACP01848 142 aa11.59□□□□□ -0.55
RBFOX1-207ENST00000547338 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
RBFOX1-207ENST00000547338 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
RBFOX1-207ENST00000547338 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
RBFOX1-207ENST00000547338 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
RBFOX1-207ENST00000547338 H0YGX0 51 aa11.57□□□□□ -0.56
RBFOX1-207ENST00000547338 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
RBFOX1-207ENST00000547338 NDUFC2O95298 119 aa11.56□□□□□ -0.56
RBFOX1-207ENST00000547338 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
RBFOX1-207ENST00000547338 DYNC1H1Q14204 4646 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-207ENST00000547338 PCP4P48539 62 aa11.55□□□□□ -0.56
RBFOX1-207ENST00000547338 KIAA1109Q2LD37 5005 aa11.55□□□□□ -0.56
RBFOX1-207ENST00000547338 PFN2P35080 140 aa11.55□□□□□ -0.56
RBFOX1-207ENST00000547338 C1orf134Q5TEV5 83 aa11.55□□□□□ -0.56
RBFOX1-207ENST00000547338 IGKV2-28A0A075B6P5 120 aa11.54□□□□□ -0.56
RBFOX1-207ENST00000547338 IGKV2D-28P01615 120 aa11.54□□□□□ -0.56
RBFOX1-207ENST00000547338 SCGB1A1P11684 91 aa11.54□□□□□ -0.56
RBFOX1-207ENST00000547338 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
RBFOX1-207ENST00000547338 HERC2O95714 4834 aa11.53□□□□□ -0.56
RBFOX1-207ENST00000547338 CLEC2BQ92478 149 aa11.52□□□□□ -0.57
RBFOX1-207ENST00000547338 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
RBFOX1-207ENST00000547338 UBE2WQ96B02 151 aa11.51□□□□□ -0.57
RBFOX1-207ENST00000547338 KLK12Q9UKR0 248 aa11.51□□□□□ -0.57
RBFOX1-207ENST00000547338 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 C6orf223Q8N319 242 aa11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 F8WDY8 70 aa11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 TNP2Q05952 138 aa11.5□□□□□ -0.57
RBFOX1-207ENST00000547338 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
RBFOX1-207ENST00000547338 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
RBFOX1-207ENST00000547338 A0A1B0GX51 115 aa11.47□□□□□ -0.57
RBFOX1-207ENST00000547338 SMIM11BQ8TCY0 68 aa11.47□□□□□ -0.57
RBFOX1-207ENST00000547338 TMEM126AQ9H061 195 aa11.46□□□□□ -0.57
RBFOX1-207ENST00000547338 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 Q8N3U1 123 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
RBFOX1-207ENST00000547338 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-207ENST00000547338 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
RBFOX1-207ENST00000547338 ACYP1P07311 99 aa11.43□□□□□ -0.58
RBFOX1-207ENST00000547338 BAALC-AS2P0C853 105 aa11.43□□□□□ -0.58
RBFOX1-207ENST00000547338 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
RBFOX1-207ENST00000547338 SNCGO76070 127 aa11.42□□□□□ -0.58
RBFOX1-207ENST00000547338 DNAL4O96015 105 aa11.42□□□□□ -0.58
RBFOX1-207ENST00000547338 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
RBFOX1-207ENST00000547338 LRP1BQ9NZR2 4599 aa11.4□□□□□ -0.58
RBFOX1-207ENST00000547338 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.59
RBFOX1-207ENST00000547338 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.59
RBFOX1-207ENST00000547338 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.59
RBFOX1-207ENST00000547338 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
RBFOX1-207ENST00000547338 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
RBFOX1-207ENST00000547338 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
RBFOX1-207ENST00000547338 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
RBFOX1-207ENST00000547338 RYR1P21817 5038 aa11.37□□□□□ -0.59
RBFOX1-207ENST00000547338 DNAH5Q8TE73 4624 aa11.37□□□□□ -0.59
RBFOX1-207ENST00000547338 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
RBFOX1-207ENST00000547338 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
RBFOX1-207ENST00000547338 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
RBFOX1-207ENST00000547338 H3BQ85 93 aa11.34□□□□□ -0.59
RBFOX1-207ENST00000547338 C9orf116Q5BN46 136 aaPredicted RBP11.34□□□□□ -0.59
RBFOX1-207ENST00000547338 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
RBFOX1-207ENST00000547338 HSPG2P98160 4391 aa11.33□□□□□ -0.6
RBFOX1-207ENST00000547338 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
RBFOX1-207ENST00000547338 C6orf48Q9UBA6 75 aa11.33□□□□□ -0.6
RBFOX1-207ENST00000547338 A0A087WYN8 130 aa11.31□□□□□ -0.6
RBFOX1-207ENST00000547338 RMI2Q96E14 147 aa11.31□□□□□ -0.6
RBFOX1-207ENST00000547338 KRTAP17-1Q9BYP8 105 aa11.31□□□□□ -0.6
RBFOX1-207ENST00000547338 ORMDL1Q9P0S3 153 aa11.31□□□□□ -0.6
RBFOX1-207ENST00000547338 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-207ENST00000547338 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
RBFOX1-207ENST00000547338 XGP55808 180 aa11.3□□□□□ -0.6
RBFOX1-207ENST00000547338 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
RBFOX1-207ENST00000547338 LECT2O14960 151 aa11.3□□□□□ -0.6
RBFOX1-207ENST00000547338 OBSCN-AS1Q96MR7 158 aa11.3□□□□□ -0.6
RBFOX1-207ENST00000547338 Q6Q795 121 aa11.29□□□□□ -0.6
RBFOX1-207ENST00000547338 Q8N814 137 aa11.29□□□□□ -0.6
RBFOX1-207ENST00000547338 C22orf24Q9Y442 160 aa11.29□□□□□ -0.6
RBFOX1-207ENST00000547338 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
RBFOX1-207ENST00000547338 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
RBFOX1-207ENST00000547338 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
RBFOX1-207ENST00000547338 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
RBFOX1-207ENST00000547338 Q9HAA7 133 aa11.28□□□□□ -0.6
RBFOX1-207ENST00000547338 GHRHP01286 108 aa11.27□□□□□ -0.61
RBFOX1-207ENST00000547338 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
RBFOX1-207ENST00000547338 FUSP35637 526 aaKnown RBP eCLIP11.27□□□□□ -0.61
RBFOX1-207ENST00000547338 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-207ENST00000547338 IGKV2D-24A0A075B6R9 120 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms