RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 Q6ZRP5 223 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 FAM19A3Q7Z5A8 133 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 DYNLRB2Q8TF09 96 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 BPY2O14599 106 aa5.46□□□□□ -1.53
UBR1-202ENST00000546274 COX7B2Q8TF08 81 aa5.46□□□□□ -1.53
UBR1-202ENST00000546274 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
UBR1-202ENST00000546274 Q8N9L7 120 aa5.46□□□□□ -1.54
UBR1-202ENST00000546274 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
UBR1-202ENST00000546274 NF1P21359 2839 aa5.46□□□□□ -1.54
UBR1-202ENST00000546274 NANOS2P60321 138 aaKnown RBP5.46□□□□□ -1.54
UBR1-202ENST00000546274 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.54
UBR1-202ENST00000546274 NTM-AS1Q6ZSK4 140 aa5.46□□□□□ -1.54
UBR1-202ENST00000546274 Q6ZTC4 211 aa5.45□□□□□ -1.54
UBR1-202ENST00000546274 Q8N814 137 aa5.45□□□□□ -1.54
UBR1-202ENST00000546274 NAV2Q8IVL1 2488 aa5.45□□□□□ -1.54
UBR1-202ENST00000546274 PRR4Q16378 134 aa5.45□□□□□ -1.54
UBR1-202ENST00000546274 MAST4O15021 2626 aa5.44□□□□□ -1.54
UBR1-202ENST00000546274 Q6ZQT0 140 aa5.44□□□□□ -1.54
UBR1-202ENST00000546274 MYO9AB2RTY4 2548 aa5.44□□□□□ -1.54
UBR1-202ENST00000546274 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 A8MUN3 132 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 APOC4P55056 127 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 KHDC1LQ5JSQ8 128 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 TRGV1A0A0A0MS02 117 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 K7EQD1 137 aa5.43□□□□□ -1.54
UBR1-202ENST00000546274 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
UBR1-202ENST00000546274 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
UBR1-202ENST00000546274 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
UBR1-202ENST00000546274 GIG44P09565 113 aaPredicted RBP5.42□□□□□ -1.54
UBR1-202ENST00000546274 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
UBR1-202ENST00000546274 NOTCH2Q04721 2471 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 ITPR3Q14573 2671 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 LY6G6DO95868 133 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 TRBV6-4A0A1B0GX49 114 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 CXCL6P80162 114 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 Q1T7F1 81 aa5.41□□□□□ -1.54
UBR1-202ENST00000546274 OTOGQ6ZRI0 2925 aa5.4□□□□□ -1.54
UBR1-202ENST00000546274 H3BS24 57 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 WNK1Q9H4A3 2382 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 M0R378 163 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 CELA1Q9UNI1 258 aa5.4□□□□□ -1.55
UBR1-202ENST00000546274 LOC100131303A0A0U1RQF7 123 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
UBR1-202ENST00000546274 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 KRTAP1-1Q07627 177 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 SPATA3Q8NHX4 192 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 LINC01006Q8NI28 216 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 ESM1Q9NQ30 184 aa5.39□□□□□ -1.55
UBR1-202ENST00000546274 CHKB-CPT1BH3BT56 60 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 WFDC10AQ9H1F0 79 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 LINC00588Q9Y4M8 146 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 CCL24O00175 119 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 CCDC168Q8NDH2 2452 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 CSNK1G2-AS1Q8NCQ2 148 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
UBR1-202ENST00000546274 UBE2BP63146 152 aa5.37□□□□□ -1.55
UBR1-202ENST00000546274 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
UBR1-202ENST00000546274 TLN2Q9Y4G6 2542 aa5.37□□□□□ -1.55
UBR1-202ENST00000546274 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
UBR1-202ENST00000546274 UBE2L6O14933 153 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.36□□□□□ -1.55
UBR1-202ENST00000546274 JMJD1CQ15652 2540 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 ANK3Q12955 4377 aaKnown RBP5.36□□□□□ -1.55
UBR1-202ENST00000546274 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 LOC110117498A0A087WWA1 95 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 C16orf74Q96GX8 76 aa5.36□□□□□ -1.55
UBR1-202ENST00000546274 C16orf90A8MZG2 172 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 Q6ZQY7 126 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 SMR3AQ99954 134 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 FLNAP21333 2647 aaKnown RBP5.35□□□□□ -1.55
UBR1-202ENST00000546274 F8P00451 2351 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 HIVEP1P15822 2718 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
UBR1-202ENST00000546274 IGHV3OR16-9A0A0B4J2B5 98 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 J3QL48 77 aa5.35□□□□□ -1.55
UBR1-202ENST00000546274 ZNF73O43830 326 aaPredicted RBP5.35□□□□□ -1.55
UBR1-202ENST00000546274 INAFM1C9JVW0 142 aa5.34□□□□□ -1.55
UBR1-202ENST00000546274 TRGV2A0A075B6R0 118 aa5.34□□□□□ -1.55
UBR1-202ENST00000546274 TRBV6-8A0A0A6YYG3 113 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 HCG22E2RYF7 251 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 IGLV1-51P01701 117 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 Q5VV11 94 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 PSCAO43653 123 aa5.33□□□□□ -1.56
UBR1-202ENST00000546274 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
UBR1-202ENST00000546274 IGKV4-1P06312 121 aa5.32□□□□□ -1.56
UBR1-202ENST00000546274 TRGV4A0A0C4DH28 118 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms