RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	CDIP1	Q9H305	208 aa		13.72	□□□□□ -0.21
RAP1B-233	ENST00000545720	IGLV7-46	A0A075B6I9	117 aa		13.71	□□□□□ -0.21
RAP1B-233	ENST00000545720	TPRXL	Q17RH7	258 aa		13.71	□□□□□ -0.21
RAP1B-233	ENST00000545720	COMMD7	Q86VX2	200 aa		13.71	□□□□□ -0.21
RAP1B-233	ENST00000545720	BAGE3	Q86Y29	109 aa		13.71	□□□□□ -0.21
RAP1B-233	ENST00000545720	RHEB	Q15382	184 aa		13.7	□□□□□ -0.22
RAP1B-233	ENST00000545720	SFTA2	Q6UW10	78 aa		13.7	□□□□□ -0.22
RAP1B-233	ENST00000545720	HIGD2A	Q9BW72	106 aa		13.7	□□□□□ -0.22
RAP1B-233	ENST00000545720	TRAPPC1	Q9Y5R8	145 aa		13.7	□□□□□ -0.22
RAP1B-233	ENST00000545720	LINC00158	P58513	81 aa		13.67	□□□□□ -0.22
RAP1B-233	ENST00000545720	C10orf91	Q5T1B1	145 aa		13.66	□□□□□ -0.22
RAP1B-233	ENST00000545720	LCE2A	Q5TA79	106 aa	Predicted RBP	13.66	□□□□□ -0.22
RAP1B-233	ENST00000545720	KRTAP9-2	Q9BYQ4	174 aa		13.66	□□□□□ -0.22
RAP1B-233	ENST00000545720		A0A0U1RRA0	63 aa		13.65	□□□□□ -0.22
RAP1B-233	ENST00000545720	CTAG1A	P78358	180 aa		13.65	□□□□□ -0.22
RAP1B-233	ENST00000545720	FAT4	Q6V0I7	4981 aa		13.64	□□□□□ -0.23
RAP1B-233	ENST00000545720	SPRR4	Q96PI1	79 aa		13.63	□□□□□ -0.23
RAP1B-233	ENST00000545720	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.63	□□□□□ -0.23
RAP1B-233	ENST00000545720	PPDPF	Q9H3Y8	114 aa		13.62	□□□□□ -0.23
RAP1B-233	ENST00000545720	TMEM223	A0PJW6	202 aa		13.59	□□□□□ -0.23
RAP1B-233	ENST00000545720	SPAG11A	Q6PDA7	123 aa		13.59	□□□□□ -0.23
RAP1B-233	ENST00000545720	MUC17	Q685J3	4493 aa		13.59	□□□□□ -0.23
RAP1B-233	ENST00000545720	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.58	□□□□□ -0.24
RAP1B-233	ENST00000545720	SMIM13	P0DJ93	91 aa		13.57	□□□□□ -0.24
RAP1B-233	ENST00000545720	PRY	O14603	147 aa		13.56	□□□□□ -0.24
RAP1B-233	ENST00000545720	NCR3	O14931	201 aa		13.56	□□□□□ -0.24
RAP1B-233	ENST00000545720	ATP6V1G1	O75348	118 aa		13.56	□□□□□ -0.24
RAP1B-233	ENST00000545720	BOD1L2	Q8IYS8	172 aa		13.56	□□□□□ -0.24
RAP1B-233	ENST00000545720	MEIG1	Q5JSS6	88 aa		13.55	□□□□□ -0.24
RAP1B-233	ENST00000545720	C4orf48	Q5BLP8	95 aa		13.54	□□□□□ -0.24
RAP1B-233	ENST00000545720	IFI27L1	Q96BM0	104 aa		13.54	□□□□□ -0.24
RAP1B-233	ENST00000545720	TRAV12-1	A0A0B4J245	112 aa		13.53	□□□□□ -0.24
RAP1B-233	ENST00000545720	DAND5	Q8N907	189 aa		13.53	□□□□□ -0.24
RAP1B-233	ENST00000545720		Q8NBF4	154 aa		13.53	□□□□□ -0.24
RAP1B-233	ENST00000545720	MIR7-3HG	Q8N6C7	128 aa		13.52	□□□□□ -0.25
RAP1B-233	ENST00000545720	FP248	Q71RG6	208 aa	Predicted RBP	13.51	□□□□□ -0.25
RAP1B-233	ENST00000545720	LINC00337	Q8N6G1	96 aa		13.51	□□□□□ -0.25
RAP1B-233	ENST00000545720	APOC3	P02656	99 aa		13.5	□□□□□ -0.25
RAP1B-233	ENST00000545720	SPRR1A	P35321	89 aa		13.5	□□□□□ -0.25
RAP1B-233	ENST00000545720	SMCR5	Q8TEV8	140 aa		13.5	□□□□□ -0.25
RAP1B-233	ENST00000545720	KCNQ1DN	Q9H478	68 aa		13.5	□□□□□ -0.25
RAP1B-233	ENST00000545720	ETDC	A0A1B0GVM5	59 aa		13.49	□□□□□ -0.25
RAP1B-233	ENST00000545720	CHCHD1	Q96BP2	118 aa	Known RBP	13.49	□□□□□ -0.25
RAP1B-233	ENST00000545720	HERV-K104	P63124	156 aa		13.48	□□□□□ -0.25
RAP1B-233	ENST00000545720	TRBV10-3	A0A0K0K1G6	114 aa		13.47	□□□□□ -0.25
RAP1B-233	ENST00000545720	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.47	□□□□□ -0.25
RAP1B-233	ENST00000545720	NDUFA12	Q9UI09	145 aa		13.46	□□□□□ -0.25
RAP1B-233	ENST00000545720	SNAPIN	O95295	136 aa		13.45	□□□□□ -0.26
RAP1B-233	ENST00000545720	KRTAP13-3	Q3SY46	172 aa		13.44	□□□□□ -0.26
RAP1B-233	ENST00000545720	LINC00587	B1AMM8	73 aa		13.43	□□□□□ -0.26
RAP1B-233	ENST00000545720	SVBP	Q8N300	66 aa		13.43	□□□□□ -0.26
RAP1B-233	ENST00000545720	MYMX	A0A1B0GTQ4	84 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720		H0Y8G0	127 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	SPINK1	P00995	79 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	NDUFA5	Q16718	116 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	LINC00483	Q53H64	154 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	GAGE2A	Q6NT46	116 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	FAM19A2	Q8N3H0	131 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	MAP1LC3C	Q9BXW4	147 aa		13.42	□□□□□ -0.26
RAP1B-233	ENST00000545720	S100A12	P80511	92 aa		13.41	□□□□□ -0.26
RAP1B-233	ENST00000545720	HSBP1	O75506	76 aa		13.4	□□□□□ -0.26
RAP1B-233	ENST00000545720	YPEL4	Q96NS1	127 aa		13.4	□□□□□ -0.26
RAP1B-233	ENST00000545720	TSPEAR-AS2	P59090	65 aa		13.39	□□□□□ -0.27
RAP1B-233	ENST00000545720	MOBP	Q13875	183 aa		13.39	□□□□□ -0.27
RAP1B-233	ENST00000545720	IGLV9-49	A0A0B4J1Y8	123 aa		13.38	□□□□□ -0.27
RAP1B-233	ENST00000545720		B5MCH6	92 aa		13.38	□□□□□ -0.27
RAP1B-233	ENST00000545720	ERC2-IT1	O76042	136 aa		13.38	□□□□□ -0.27
RAP1B-233	ENST00000545720	DDT	P30046	118 aa		13.36	□□□□□ -0.27
RAP1B-233	ENST00000545720	ASB16-AS1	Q495Z4	193 aa		13.36	□□□□□ -0.27
RAP1B-233	ENST00000545720	LEPROT	O15243	131 aa		13.34	□□□□□ -0.27
RAP1B-233	ENST00000545720		Q9BRP9	147 aa		13.34	□□□□□ -0.27
RAP1B-233	ENST00000545720	LOC107984156	A0A0G2JMH3	177 aa		13.32	□□□□□ -0.28
RAP1B-233	ENST00000545720	TRBV10-2	A0A0K0K1G8	114 aa		13.32	□□□□□ -0.28
RAP1B-233	ENST00000545720		Q6ZRX8	168 aa		13.32	□□□□□ -0.28
RAP1B-233	ENST00000545720	ARL17A	Q8IVW1	177 aa		13.32	□□□□□ -0.28
RAP1B-233	ENST00000545720		Q8N377	158 aa		13.31	□□□□□ -0.28
RAP1B-233	ENST00000545720	LEPROTL1	O95214	131 aa		13.3	□□□□□ -0.28
RAP1B-233	ENST00000545720	SSBP3-AS1	Q7Z2R9	100 aa		13.3	□□□□□ -0.28
RAP1B-233	ENST00000545720	MIEN1	Q9BRT3	115 aa		13.3	□□□□□ -0.28
RAP1B-233	ENST00000545720	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.3	□□□□□ -0.28
RAP1B-233	ENST00000545720	KRTAP9-6	A0A140TA67	174 aa		13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720		J3QQQ9	107 aa		13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720	PLN	P26678	52 aa		13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720	SEC61B	P60468	96 aa	Known RBP	13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720	RPS29	P62273	56 aa	Known RBP	13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720	KRTAP4-1	Q9BYQ7	146 aa		13.29	□□□□□ -0.28
RAP1B-233	ENST00000545720	S100A7L2	Q5SY68	101 aa		13.27	□□□□□ -0.29
RAP1B-233	ENST00000545720	SERF1A	O75920	110 aa		13.26	□□□□□ -0.29
RAP1B-233	ENST00000545720	LINC00310	P59036	64 aa		13.26	□□□□□ -0.29
RAP1B-233	ENST00000545720	HERVK_113	P61574	105 aa		13.26	□□□□□ -0.29
RAP1B-233	ENST00000545720	SLC25A20	O43772	301 aa		13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	IGLV6-57	P01721	117 aa		13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	TRGC2	P03986	189 aa		13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	LGALS3	P17931	250 aa	Known RBP	13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	LINC01547	P58512	204 aa	Predicted RBP	13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	PMCHL2	Q9BQD1	86 aa		13.25	□□□□□ -0.29
RAP1B-233	ENST00000545720	DPM2	O94777	84 aa		13.24	□□□□□ -0.29
RAP1B-233	ENST00000545720	NMU	P48645	174 aa		13.24	□□□□□ -0.29
RAP1B-233	ENST00000545720	C9orf153	Q5TBE3	101 aa		13.24	□□□□□ -0.29
RAP1B-233	ENST00000545720	TRAV23DV6	A0A075B6W5	121 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms