RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 COX17Q14061 63 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
RTN3-214ENST00000545432 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
RTN3-214ENST00000545432 ADCYAP1P18509 176 aa8.07□□□□□ -1.12
RTN3-214ENST00000545432 PFN2P35080 140 aa8.07□□□□□ -1.12
RTN3-214ENST00000545432 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
RTN3-214ENST00000545432 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
RTN3-214ENST00000545432 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
RTN3-214ENST00000545432 SLC25A20O43772 301 aa8.06□□□□□ -1.12
RTN3-214ENST00000545432 SPRR1AP35321 89 aa8.06□□□□□ -1.12
RTN3-214ENST00000545432 RAB14P61106 215 aa8.06□□□□□ -1.12
RTN3-214ENST00000545432 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
RTN3-214ENST00000545432 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
RTN3-214ENST00000545432 LINC01549A6NIU2 74 aa8.05□□□□□ -1.12
RTN3-214ENST00000545432 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
RTN3-214ENST00000545432 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
RTN3-214ENST00000545432 SCGB3A1Q96QR1 104 aa8.05□□□□□ -1.12
RTN3-214ENST00000545432 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
RTN3-214ENST00000545432 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
RTN3-214ENST00000545432 H3BRM9 83 aa8.02□□□□□ -1.13
RTN3-214ENST00000545432 PMVKQ15126 192 aa8.01□□□□□ -1.13
RTN3-214ENST00000545432 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
RTN3-214ENST00000545432 PRYO14603 147 aa8□□□□□ -1.13
RTN3-214ENST00000545432 IGLC3P0DOY3 106 aa8□□□□□ -1.13
RTN3-214ENST00000545432 PCOTHQ58A44 107 aa8□□□□□ -1.13
RTN3-214ENST00000545432 IGLV8-61A0A075B6I0 122 aa7.99□□□□□ -1.13
RTN3-214ENST00000545432 ZNF625Q96I27 306 aaPredicted RBP7.98□□□□□ -1.13
RTN3-214ENST00000545432 ZNF22P17026 224 aaPredicted RBP7.97□□□□□ -1.13
RTN3-214ENST00000545432 MOBPQ13875 183 aa7.97□□□□□ -1.13
RTN3-214ENST00000545432 SFTA2Q6UW10 78 aa7.97□□□□□ -1.13
RTN3-214ENST00000545432 SSPOA2VEC9 5147 aa7.97□□□□□ -1.13
RTN3-214ENST00000545432 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
RTN3-214ENST00000545432 CLLU1Q5K131 121 aa7.95□□□□□ -1.14
RTN3-214ENST00000545432 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
RTN3-214ENST00000545432 UQCC3Q6UW78 93 aa7.94□□□□□ -1.14
RTN3-214ENST00000545432 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
RTN3-214ENST00000545432 ERC2-IT1O76042 136 aa7.93□□□□□ -1.14
RTN3-214ENST00000545432 S100PP25815 95 aa7.93□□□□□ -1.14
RTN3-214ENST00000545432 KIAA1644Q3SXP7 199 aa7.93□□□□□ -1.14
RTN3-214ENST00000545432 B5MCH6 92 aa7.92□□□□□ -1.14
RTN3-214ENST00000545432 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
RTN3-214ENST00000545432 M0R2T5 61 aa7.91□□□□□ -1.14
RTN3-214ENST00000545432 USH2AO75445 5202 aa7.91□□□□□ -1.14
RTN3-214ENST00000545432 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
RTN3-214ENST00000545432 LINC00158P58513 81 aa7.9□□□□□ -1.14
RTN3-214ENST00000545432 COX19Q49B96 90 aa7.9□□□□□ -1.14
RTN3-214ENST00000545432 TRBV10-3A0A0K0K1G6 114 aa7.89□□□□□ -1.15
RTN3-214ENST00000545432 Q9BRP9 147 aa7.89□□□□□ -1.15
RTN3-214ENST00000545432 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
RTN3-214ENST00000545432 A0A096LNJ9 63 aa7.88□□□□□ -1.15
RTN3-214ENST00000545432 FA2HQ7L5A8 372 aa7.88□□□□□ -1.15
RTN3-214ENST00000545432 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
RTN3-214ENST00000545432 SEC11CQ9BY50 192 aa7.88□□□□□ -1.15
RTN3-214ENST00000545432 C11orf86A6NJI1 115 aa7.87□□□□□ -1.15
RTN3-214ENST00000545432 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
RTN3-214ENST00000545432 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
RTN3-214ENST00000545432 A0A0U1RRA0 63 aa7.84□□□□□ -1.15
RTN3-214ENST00000545432 NCR3O14931 201 aa7.84□□□□□ -1.15
RTN3-214ENST00000545432 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
RTN3-214ENST00000545432 Q6ZRX8 168 aa7.84□□□□□ -1.15
RTN3-214ENST00000545432 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
RTN3-214ENST00000545432 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
RTN3-214ENST00000545432 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
RTN3-214ENST00000545432 RHEBQ15382 184 aa7.83□□□□□ -1.16
RTN3-214ENST00000545432 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
RTN3-214ENST00000545432 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
RTN3-214ENST00000545432 MIR7-3HGQ8N6C7 128 aa7.82□□□□□ -1.16
RTN3-214ENST00000545432 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
RTN3-214ENST00000545432 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
RTN3-214ENST00000545432 NDUFA6P56556 154 aa7.81□□□□□ -1.16
RTN3-214ENST00000545432 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
RTN3-214ENST00000545432 IGLV6-57P01721 117 aa7.8□□□□□ -1.16
RTN3-214ENST00000545432 S100A12P80511 92 aa7.8□□□□□ -1.16
RTN3-214ENST00000545432 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
RTN3-214ENST00000545432 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
RTN3-214ENST00000545432 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
RTN3-214ENST00000545432 ATP6V1G1O75348 118 aa7.79□□□□□ -1.16
RTN3-214ENST00000545432 HERV-K104P63124 156 aa7.79□□□□□ -1.16
RTN3-214ENST00000545432 C9orf153Q5TBE3 101 aa7.79□□□□□ -1.16
RTN3-214ENST00000545432 COX6B2Q6YFQ2 88 aa7.79□□□□□ -1.16
RTN3-214ENST00000545432 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
RTN3-214ENST00000545432 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 HBDP02042 147 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 SPRR1BP22528 89 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 DDTP30046 118 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
RTN3-214ENST00000545432 IFITM2Q01629 132 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
RTN3-214ENST00000545432 LINC00614P0C842 121 aa7.77□□□□□ -1.17
RTN3-214ENST00000545432 JOSD1Q15040 202 aaPredicted RBP7.76□□□□□ -1.17
RTN3-214ENST00000545432 MEIG1Q5JSS6 88 aa7.76□□□□□ -1.17
RTN3-214ENST00000545432 Q5XG85 94 aa7.76□□□□□ -1.17
RTN3-214ENST00000545432 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
RTN3-214ENST00000545432 TRAPPC1Q9Y5R8 145 aa7.76□□□□□ -1.17
RTN3-214ENST00000545432 ST20-AS1Q8NBB2 130 aa7.75□□□□□ -1.17
RTN3-214ENST00000545432 C18orf32Q8TCD1 76 aa7.75□□□□□ -1.17
RTN3-214ENST00000545432 CFC1P0CG37 223 aa7.74□□□□□ -1.17
RTN3-214ENST00000545432 CD164Q04900 197 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms