RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 HIGD1CA8MV81 97 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 PRYO14603 147 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 HSBP1O75506 76 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 KRTDAPP60985 99 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 MT1HP80294 61 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 SNHG12Q9BXW3 62 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 SPANXA1Q9NS26 97 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
CHD4-212ENST00000545083 LINC00614P0C842 121 aa5.3□□□□□ -1.56
CHD4-212ENST00000545083 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
CHD4-212ENST00000545083 CHCHD1Q96BP2 118 aaKnown RBP5.3□□□□□ -1.56
CHD4-212ENST00000545083 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 PPP1R17O96001 155 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 UBE2AP49459 152 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 MRPL51Q4U2R6 128 aaKnown RBP5.29□□□□□ -1.56
CHD4-212ENST00000545083 MRPL54Q6P161 138 aaKnown RBP5.29□□□□□ -1.56
CHD4-212ENST00000545083 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
CHD4-212ENST00000545083 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 PAM16Q9Y3D7 125 aa5.29□□□□□ -1.56
CHD4-212ENST00000545083 LINC00310P59036 64 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
CHD4-212ENST00000545083 RIGQ13278 110 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 SPATA45Q537H7 98 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 C20orf78Q9BR46 151 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 ALKBH7Q9BT30 221 aaPredicted RBP5.28□□□□□ -1.56
CHD4-212ENST00000545083 VCX2Q9H322 139 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 TOMM7Q9P0U1 55 aa5.28□□□□□ -1.56
CHD4-212ENST00000545083 A0A1B0GXF2 115 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
CHD4-212ENST00000545083 DLEU1O43261 78 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 C3orf79P0CE67 100 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 IGLC3P0DOY3 106 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 RPL32P62910 135 aaKnown RBP5.27□□□□□ -1.57
CHD4-212ENST00000545083 FAM104BQ5XKR9 115 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 SMIM2Q9BVW6 85 aa5.27□□□□□ -1.57
CHD4-212ENST00000545083 IGLV4-3A0A075B6K6 122 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
CHD4-212ENST00000545083 CKS1BP61024 79 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 PRLHP81277 87 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 ZC2HC1BQ5TFG8 222 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 Q6ZN92 141 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 LINC01561Q8N1V8 128 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 PMCHL2Q9BQD1 86 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 HSPB8Q9UJY1 196 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 LAMTOR2Q9Y2Q5 125 aa5.26□□□□□ -1.57
CHD4-212ENST00000545083 PRSS2P07478 247 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 CFC1BP0CG36 223 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 C6orf226Q5I0X4 101 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 Q8IZM0 81 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
CHD4-212ENST00000545083 LEPROTL1O95214 131 aa5.24□□□□□ -1.57
CHD4-212ENST00000545083 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
CHD4-212ENST00000545083 TMEM141Q96I45 108 aa5.24□□□□□ -1.57
CHD4-212ENST00000545083 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
CHD4-212ENST00000545083 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 IGKV2-28A0A075B6P5 120 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 F8VRH5 84 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 NPYP01303 97 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 IGKV2D-28P01615 120 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 G0S2P27469 103 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 CKS2P33552 79 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
CHD4-212ENST00000545083 D6R8Y8 96 aa5.22□□□□□ -1.57
CHD4-212ENST00000545083 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
CHD4-212ENST00000545083 BATFQ16520 125 aa5.22□□□□□ -1.57
CHD4-212ENST00000545083 SLC25A34Q6PIV7 304 aa5.22□□□□□ -1.57
CHD4-212ENST00000545083 FAM19A2Q8N3H0 131 aa5.22□□□□□ -1.57
CHD4-212ENST00000545083 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 TMEM238C9JI98 176 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 XP32Q5T750 250 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 FA2HQ7L5A8 372 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 FAM19A1Q7Z5A9 133 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 DAND5Q8N907 189 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
CHD4-212ENST00000545083 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
CHD4-212ENST00000545083 PPBPP02775 128 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 Q8NBF4 154 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 AMELXQ99217 191 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 TMEM126AQ9H061 195 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
CHD4-212ENST00000545083 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
CHD4-212ENST00000545083 UBE2V1Q13404 147 aa5.19□□□□□ -1.58
CHD4-212ENST00000545083 C2orf66Q6UXQ4 117 aa5.19□□□□□ -1.58
CHD4-212ENST00000545083 FAM19A3Q7Z5A8 133 aa5.19□□□□□ -1.58
CHD4-212ENST00000545083 M0R378 163 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 SEC11AP67812 179 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 LINC01545Q5VT33 79 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 ORMDL3Q8N138 153 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 SPRR4Q96PI1 79 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 USH2AO75445 5202 aa5.18□□□□□ -1.58
CHD4-212ENST00000545083 CXCL5P42830 114 aa5.17□□□□□ -1.58
CHD4-212ENST00000545083 HINT1P49773 126 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms