RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 DSCR8Q96T75 97 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 GNG8Q9UK08 70 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 LINC00312Q9Y6C7 94 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 SVEP1Q4LDE5 3571 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 DOT1LQ8TEK3 1739 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 FAT3Q8TDW7 4589 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 USH2AO75445 5202 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 NIPBLQ6KC79 2804 aaeCLIP0.4□□□□□ -2.35
CCDC170-203ENST00000544131 MEGF8Q7Z7M0 2845 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 PLXNC1O60486 1568 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 DCHS2Q6V1P9 2916 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.35
CCDC170-203ENST00000544131 TNCP24821 2201 aa0.4□□□□□ -2.35
CCDC170-203ENST00000544131 PRRC2CQ9Y520 2896 aaKnown RBP0.39□□□□□ -2.35
CCDC170-203ENST00000544131 ANKRD50Q9ULJ7 1429 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 AKAP13Q12802 2813 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 OTOGQ6ZRI0 2925 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 DYNC2H1Q8NCM8 4307 aaKnown RBP0.39□□□□□ -2.35
CCDC170-203ENST00000544131 ANKRD36A6QL64 1941 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 TRGV1A0A0A0MS02 117 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 TRBV7-1A0A0A6YYK4 115 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 TRBV10-3A0A0K0K1G6 114 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 OOSP1A8MZH6 123 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 HCG22E2RYF7 251 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 F6UZH7 168 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 APODP05090 189 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 CBLN1P23435 193 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 KLKP1Q107X0 134 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 DEFB121Q5J5C9 76 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 MRPL54Q6P161 138 aaKnown RBP0.39□□□□□ -2.35
CCDC170-203ENST00000544131 PP6455Q8WZ26 134 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 Q96NJ1 140 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 RERGLQ9H628 205 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 COA4Q9NYJ1 87 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 BET1LQ9NYM9 111 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 SERP1Q9Y6X1 66 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 DNAH1Q9P2D7 4330 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 LAMA5O15230 3695 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 PRKDCP78527 4128 aaKnown RBP0.39□□□□□ -2.35
CCDC170-203ENST00000544131 LRBAP50851 2863 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 CHD7Q9P2D1 2997 aa0.39□□□□□ -2.35
CCDC170-203ENST00000544131 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 MAP1AP78559 2803 aaPredicted RBP0.38□□□□□ -2.35
CCDC170-203ENST00000544131 TRRAPQ9Y4A5 3859 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 ARFGEF2Q9Y6D5 1785 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 DNAH7Q8WXX0 4024 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 A0A096LNT2 108 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 TRAV13-2A0A0B4J235 113 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 ACYP2P14621 99 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 EDDM3BP56851 147 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 RPL37P61927 97 aaKnown RBP0.38□□□□□ -2.35
CCDC170-203ENST00000544131 Q56UQ5 140 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 C10orf128Q5T292 105 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 C9orf153Q5TBE3 101 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 C10orf99Q6UWK7 81 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 C1orf54Q8WWF1 131 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 C2orf88Q9BSF0 95 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 FAM103A1Q9BTL3 118 aaKnown RBP0.38□□□□□ -2.35
CCDC170-203ENST00000544131 SNRNP25Q9BV90 132 aaKnown RBP0.38□□□□□ -2.35
CCDC170-203ENST00000544131 NAA60Q9H7X0 242 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 LINC00474Q9P2X8 69 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 V9GYV3 84 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 MGAQ8IWI9 3026 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 CHD9Q3L8U1 2897 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 DAPK1P53355 1430 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 NAIPQ13075 1403 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 DMXL2Q8TDJ6 3036 aa0.38□□□□□ -2.35
CCDC170-203ENST00000544131 ATMQ13315 3056 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 TRAV1-2A0A0B4J238 106 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 RBAKDNA6NC62 111 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 APOC4-APOC2K7ER74 178 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 IFNA17P01571 189 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 IFNGP01579 166 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 APOC2P02655 101 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 FGF7P21781 194 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 TPPP2P59282 170 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 SPINK13Q1W4C9 94 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 FAM74A4Q5TZK3 123 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 Q6AWC8 147 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 KRTAP19-3Q7Z4W3 81 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 TTC9CQ8N5M4 171 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 COPS9Q8WXC6 57 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 CMYA5Q8N3K9 4069 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 EDC4Q6P2E9 1401 aaKnown RBP0.37□□□□□ -2.35
CCDC170-203ENST00000544131 USF3Q68DE3 2245 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 A0A1B0GUL6 1792 aa0.37□□□□□ -2.35
CCDC170-203ENST00000544131 CRYBG1Q9Y4K1 1723 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 CCNB3Q8WWL7 1395 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 DNAJC13O75165 2243 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 GVQW2A0A096LPI5 108 aaPredicted RBP0.36□□□□□ -2.35
CCDC170-203ENST00000544131 F2Z2F3 143 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 ATP6V1G2-DDX39BF2Z307 99 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 CORTO00230 105 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 PPP1R17O96001 155 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 CCL8P80075 99 aa0.36□□□□□ -2.35
CCDC170-203ENST00000544131 Q5VSD8 79 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms