RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 WNK1Q9H4A3 2382 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 M0R378 163 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 CLPSL2Q6UWE3 100 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 LINC01006Q8NI28 216 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 LCE6AA0A183 80 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 NDUFB1O75438 58 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 DEFB130BP0DP73 79 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 DEFB130AP0DP74 79 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
LMO3-229ENST00000543721 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 CELA1Q9UNI1 258 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 CEP295Q9C0D2 2601 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 EPG5Q9HCE0 2579 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
LMO3-229ENST00000543721 SETD2Q9BYW2 2564 aaPredicted RBP3.36□□□□□ -1.87
LMO3-229ENST00000543721 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 DAD1P61803 113 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 Q8NDZ9 215 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 IGF2RP11717 2491 aa3.36□□□□□ -1.87
LMO3-229ENST00000543721 MUC3AQ02505 3323 aa3.35□□□□□ -1.87
LMO3-229ENST00000543721 BBC3Q96PG8 261 aaPredicted RBP3.35□□□□□ -1.87
LMO3-229ENST00000543721 C19orf73Q9NVV2 129 aa3.35□□□□□ -1.87
LMO3-229ENST00000543721 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
LMO3-229ENST00000543721 IGLV10-54A0A075B6I4 117 aa3.35□□□□□ -1.87
LMO3-229ENST00000543721 ETDCA0A1B0GVM5 59 aa3.35□□□□□ -1.87
LMO3-229ENST00000543721 EGFEM1PQ0D2K5 195 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 C10orf25Q5T742 122 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 LELP1Q5T871 98 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 PKD1L2Q7Z442 2459 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 TACC2O95359 2948 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 MTORP42345 2549 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.87
LMO3-229ENST00000543721 IGLV5-48A0A075B6I7 105 aa3.34□□□□□ -1.88
LMO3-229ENST00000543721 VPREB1P12018 145 aa3.34□□□□□ -1.88
LMO3-229ENST00000543721 WDFY4Q6ZS81 3184 aa3.34□□□□□ -1.88
LMO3-229ENST00000543721 HIVEP3Q5T1R4 2406 aa3.34□□□□□ -1.88
LMO3-229ENST00000543721 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.88
LMO3-229ENST00000543721 CD164Q04900 197 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
LMO3-229ENST00000543721 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 ADGRG4Q8IZF6 3080 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 USP9XQ93008 2570 aaPredicted RBP3.33□□□□□ -1.88
LMO3-229ENST00000543721 C1orf64Q8NEQ6 169 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 C6orf48Q9UBA6 75 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 NAV2Q8IVL1 2488 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 Q8N9L7 120 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 DHRS4-AS1Q9P1J3 65 aa3.33□□□□□ -1.88
LMO3-229ENST00000543721 UBE2BP63146 152 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 KPRPQ5T749 579 aaPredicted RBP3.32□□□□□ -1.88
LMO3-229ENST00000543721 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 FAM30AQ9NZY2 134 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 MP68P56378 58 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 Q6ZRP5 223 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 XAGE1AQ9HD64 81 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 DCHS1Q96JQ0 3298 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 A0A096LPF7 62 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 H3BPC8 53 aa3.32□□□□□ -1.88
LMO3-229ENST00000543721 C2CD3Q4AC94 2353 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 C3orf84H3BNL1 204 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 WFDC10AQ9H1F0 79 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 TRAV22A0A0B4J277 110 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 UBE2AP49459 152 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 X6R8D5 127 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 HRNRQ86YZ3 2850 aaPredicted RBP3.31□□□□□ -1.88
LMO3-229ENST00000543721 Q8NBF4 154 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
LMO3-229ENST00000543721 KCNQ1DNQ9H478 68 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 SETXQ7Z333 2677 aaKnown RBP3.3□□□□□ -1.88
LMO3-229ENST00000543721 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 PSCAO43653 123 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 MRPL55Q7Z7F7 128 aaKnown RBP3.3□□□□□ -1.88
LMO3-229ENST00000543721 NKAPP1Q8N9T2 125 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 MAPK1IP1LQ8NDC0 245 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 RETNQ9HD89 108 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 SMG1Q96Q15 3661 aaKnown RBP3.3□□□□□ -1.88
LMO3-229ENST00000543721 HCG22E2RYF7 251 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
LMO3-229ENST00000543721 APOC4P55056 127 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 C1orf137Q5JT78 98 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 SERTAD4-AS1Q5TG53 156 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 Q8N377 158 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 ATRQ13535 2644 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.29□□□□□ -1.88
LMO3-229ENST00000543721 B9D2Q9BPU9 175 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 LRBAP50851 2863 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 PSPHP1O15172 72 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 NDUFS5O43920 106 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 SPART-AS1P0CW21 52 aa3.29□□□□□ -1.88
LMO3-229ENST00000543721 H3BS24 57 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 DEFB113Q30KQ7 82 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 PLA2G2DQ9UNK4 145 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 BOD1L1Q8NFC6 3051 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms