RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 C10orf91Q5T1B1 145 aa11.34□□□□□ -0.59
CACNA1C-230ENST00000543114 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
CACNA1C-230ENST00000543114 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
CACNA1C-230ENST00000543114 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
CACNA1C-230ENST00000543114 C3orf22Q8N5N4 141 aa11.32□□□□□ -0.6
CACNA1C-230ENST00000543114 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
CACNA1C-230ENST00000543114 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
CACNA1C-230ENST00000543114 SFTA2Q6UW10 78 aa11.31□□□□□ -0.6
CACNA1C-230ENST00000543114 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
CACNA1C-230ENST00000543114 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
CACNA1C-230ENST00000543114 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-230ENST00000543114 CDIP1Q9H305 208 aa11.29□□□□□ -0.6
CACNA1C-230ENST00000543114 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
CACNA1C-230ENST00000543114 LINC00158P58513 81 aa11.27□□□□□ -0.61
CACNA1C-230ENST00000543114 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
CACNA1C-230ENST00000543114 CTAG1AP78358 180 aa11.26□□□□□ -0.61
CACNA1C-230ENST00000543114 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-230ENST00000543114 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
CACNA1C-230ENST00000543114 KRTAP9-2Q9BYQ4 174 aa11.25□□□□□ -0.61
CACNA1C-230ENST00000543114 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
CACNA1C-230ENST00000543114 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
CACNA1C-230ENST00000543114 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
CACNA1C-230ENST00000543114 PRYO14603 147 aa11.2□□□□□ -0.62
CACNA1C-230ENST00000543114 NCR3O14931 201 aa11.2□□□□□ -0.62
CACNA1C-230ENST00000543114 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
CACNA1C-230ENST00000543114 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
CACNA1C-230ENST00000543114 BOD1L2Q8IYS8 172 aa11.19□□□□□ -0.62
CACNA1C-230ENST00000543114 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
CACNA1C-230ENST00000543114 ZNF706Q9Y5V0 76 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-230ENST00000543114 APOC3P02656 99 aa11.18□□□□□ -0.62
CACNA1C-230ENST00000543114 SPRR1AP35321 89 aa11.18□□□□□ -0.62
CACNA1C-230ENST00000543114 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
CACNA1C-230ENST00000543114 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
CACNA1C-230ENST00000543114 ATP6V1G1O75348 118 aa11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 LINC00337Q8N6G1 96 aa11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 DAND5Q8N907 189 aa11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 Q8NBF4 154 aa11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-230ENST00000543114 KRTAP4-16G5E9R7 235 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-230ENST00000543114 KCNQ1DNQ9H478 68 aa11.15□□□□□ -0.62
CACNA1C-230ENST00000543114 FP248Q71RG6 208 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-230ENST00000543114 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
CACNA1C-230ENST00000543114 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 SNAPINO95295 136 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 HERV-K104P63124 156 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 SVBPQ8N300 66 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 SMCR5Q8TEV8 140 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
CACNA1C-230ENST00000543114 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
CACNA1C-230ENST00000543114 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
CACNA1C-230ENST00000543114 TSPEAR-AS2P59090 65 aa11.1□□□□□ -0.63
CACNA1C-230ENST00000543114 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
CACNA1C-230ENST00000543114 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
CACNA1C-230ENST00000543114 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
CACNA1C-230ENST00000543114 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
CACNA1C-230ENST00000543114 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
CACNA1C-230ENST00000543114 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
CACNA1C-230ENST00000543114 H0Y8G0 127 aa11.07□□□□□ -0.64
CACNA1C-230ENST00000543114 HSBP1O75506 76 aa11.07□□□□□ -0.64
CACNA1C-230ENST00000543114 B5MCH6 92 aa11.06□□□□□ -0.64
CACNA1C-230ENST00000543114 ERC2-IT1O76042 136 aa11.06□□□□□ -0.64
CACNA1C-230ENST00000543114 SPINK1P00995 79 aa11.06□□□□□ -0.64
CACNA1C-230ENST00000543114 GAGE2AQ6NT46 116 aa11.06□□□□□ -0.64
CACNA1C-230ENST00000543114 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
CACNA1C-230ENST00000543114 MOBPQ13875 183 aa11.05□□□□□ -0.64
CACNA1C-230ENST00000543114 IGLV9-49A0A0B4J1Y8 123 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 DDTP30046 118 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 S100A12P80511 92 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 Q9BRP9 147 aa11.03□□□□□ -0.64
CACNA1C-230ENST00000543114 LINC00310P59036 64 aa11.02□□□□□ -0.65
CACNA1C-230ENST00000543114 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
CACNA1C-230ENST00000543114 TRBV10-2A0A0K0K1G8 114 aa11.01□□□□□ -0.65
CACNA1C-230ENST00000543114 LEPROTO15243 131 aa11.01□□□□□ -0.65
CACNA1C-230ENST00000543114 Q6ZRX8 168 aa11.01□□□□□ -0.65
CACNA1C-230ENST00000543114 Q8N377 158 aa11□□□□□ -0.65
CACNA1C-230ENST00000543114 J3QQQ9 107 aa10.99□□□□□ -0.65
CACNA1C-230ENST00000543114 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
CACNA1C-230ENST00000543114 KRTAP4-1Q9BYQ7 146 aa10.99□□□□□ -0.65
CACNA1C-230ENST00000543114 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
CACNA1C-230ENST00000543114 SERF1AO75920 110 aa10.98□□□□□ -0.65
CACNA1C-230ENST00000543114 PLNP26678 52 aa10.98□□□□□ -0.65
CACNA1C-230ENST00000543114 RPS29P62273 56 aaKnown RBP10.98□□□□□ -0.65
CACNA1C-230ENST00000543114 TRGC2P03986 189 aa10.97□□□□□ -0.65
CACNA1C-230ENST00000543114 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
CACNA1C-230ENST00000543114 MIEN1Q9BRT3 115 aa10.97□□□□□ -0.65
CACNA1C-230ENST00000543114 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
CACNA1C-230ENST00000543114 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.65
CACNA1C-230ENST00000543114 KRTAP9-6A0A140TA67 174 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 DPM2O94777 84 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 NDUFC2O95298 119 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 NMUP48645 174 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 HERVK_113P61574 105 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
CACNA1C-230ENST00000543114 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
CACNA1C-230ENST00000543114 EIF4EBP3O60516 100 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-230ENST00000543114 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms