RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 SLPIP03973 132 aa7.98□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LINC00158P58513 81 aa7.97□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 PFN2P35080 140 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 TNP2Q05952 138 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 MIR7-3HGQ8N6C7 128 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 HIST1H4GQ99525 98 aa7.96□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 LOC107984640A0A0U1RRK4 108 aa7.95□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 M0R143 59 aa7.95□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 J3QL48 77 aa7.94□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 A6NJY4 79 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 CTAG1AP78358 180 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 SERTAD4-AS1Q5TG53 156 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 CEND1Q8N111 149 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 IGLV5-52A0A0A0MRZ9 124 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 PCP4L1A6NKN8 68 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 NDUFC2O95298 119 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 RPL18AQ02543 176 aaKnown RBP7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 Q6ZRP5 223 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 MUSTN1Q8IVN3 82 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 DAND5Q8N907 189 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 PGPEP1Q9NXJ5 209 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 LINC00474Q9P2X8 69 aa7.91□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 KRTAP9-6A0A140TA67 174 aa7.9□□□□□ -1.14
CACNA1C-IT3-201ENST00000542680 BVES-AS1Q5T3Y7 98 aa7.89□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 Q5VSD8 79 aa7.89□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 SOSTDC1Q6X4U4 206 aa7.89□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 SDIM1Q6ZPB5 146 aa7.88□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 A4D1N5 150 aa7.87□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 A6NDN8 102 aa7.87□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 FXYD2P54710 66 aa7.87□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 NPC2P61916 151 aa7.87□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 LRP2P98164 4655 aa7.87□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 A0A096LNI7 61 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 GAGE2BQ13066 116 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 XAGE1AQ9HD64 81 aa7.86□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 IGLV5-37A0A075B6J1 123 aa7.84□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 KRTAP10-2P60368 255 aa7.84□□□□□ -1.15
CACNA1C-IT3-201ENST00000542680 TRAV13-2A0A0B4J235 113 aa7.83□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 VPREB1P12018 145 aa7.83□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 SPACA4Q8TDM5 124 aa7.83□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 CFC1P0CG37 223 aa7.82□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 RAB37Q96AX2 223 aa7.82□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 M0R378 163 aa7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 BATFQ16520 125 aa7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 LBHQ53QV2 105 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 TMEM126AQ9H061 195 aa7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 PRO1854Q9UHT4 67 aa7.8□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 Q6ZSA8 131 aa7.79□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 Q8NDZ9 215 aa7.79□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 CHTF8P0CG12 524 aa7.78□□□□□ -1.16
CACNA1C-IT3-201ENST00000542680 NCR3O14931 201 aa7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 XGP55808 180 aa7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 A0A1W2PNN7 141 aa7.76□□□□□ -1.17
CACNA1C-IT3-201ENST00000542680 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms