RNA–Protein interactions for RNA: ENST00000542436.1

SCNN1A-218, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-218ENST00000542436 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
SCNN1A-218ENST00000542436 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
SCNN1A-218ENST00000542436 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
SCNN1A-218ENST00000542436 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
SCNN1A-218ENST00000542436 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
SCNN1A-218ENST00000542436 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
SCNN1A-218ENST00000542436 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
SCNN1A-218ENST00000542436 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
SCNN1A-218ENST00000542436 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
SCNN1A-218ENST00000542436 DPM2O94777 84 aa9.19□□□□□ -0.94
SCNN1A-218ENST00000542436 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
SCNN1A-218ENST00000542436 BCE1O60756 84 aa9.18□□□□□ -0.94
SCNN1A-218ENST00000542436 IGKCP01834 107 aa9.18□□□□□ -0.94
SCNN1A-218ENST00000542436 PLNP26678 52 aa9.18□□□□□ -0.94
SCNN1A-218ENST00000542436 PYY3Q5JQD4 70 aa9.18□□□□□ -0.94
SCNN1A-218ENST00000542436 TINCRA0A1B0GVN0 87 aa9.16□□□□□ -0.94
SCNN1A-218ENST00000542436 SMIM6P0DI80 62 aa9.16□□□□□ -0.94
SCNN1A-218ENST00000542436 IGLC3P0DOY3 106 aa9.16□□□□□ -0.94
SCNN1A-218ENST00000542436 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
SCNN1A-218ENST00000542436 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.94
SCNN1A-218ENST00000542436 CRYGAP11844 174 aa9.15□□□□□ -0.94
SCNN1A-218ENST00000542436 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
SCNN1A-218ENST00000542436 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
SCNN1A-218ENST00000542436 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
SCNN1A-218ENST00000542436 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
SCNN1A-218ENST00000542436 S100A12P80511 92 aa9.14□□□□□ -0.95
SCNN1A-218ENST00000542436 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
SCNN1A-218ENST00000542436 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
SCNN1A-218ENST00000542436 H3BRM9 83 aa9.13□□□□□ -0.95
SCNN1A-218ENST00000542436 TSPAN13O95857 204 aa9.13□□□□□ -0.95
SCNN1A-218ENST00000542436 HERVK_113P61574 105 aa9.13□□□□□ -0.95
SCNN1A-218ENST00000542436 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 A0A087X002 238 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
SCNN1A-218ENST00000542436 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
SCNN1A-218ENST00000542436 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
SCNN1A-218ENST00000542436 UBE2AP49459 152 aa9.1□□□□□ -0.95
SCNN1A-218ENST00000542436 GAGE10A6NGK3 116 aa9.09□□□□□ -0.95
SCNN1A-218ENST00000542436 C12orf57Q99622 126 aa9.09□□□□□ -0.95
SCNN1A-218ENST00000542436 MUC2Q02817 5179 aa9.09□□□□□ -0.95
SCNN1A-218ENST00000542436 SPINK8P0C7L1 97 aa9.08□□□□□ -0.96
SCNN1A-218ENST00000542436 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
SCNN1A-218ENST00000542436 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
SCNN1A-218ENST00000542436 SPATA45Q537H7 98 aa9.07□□□□□ -0.96
SCNN1A-218ENST00000542436 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
SCNN1A-218ENST00000542436 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
SCNN1A-218ENST00000542436 E9PLD3 99 aa9.05□□□□□ -0.96
SCNN1A-218ENST00000542436 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
SCNN1A-218ENST00000542436 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
SCNN1A-218ENST00000542436 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
SCNN1A-218ENST00000542436 LEPROTO15243 131 aa9.04□□□□□ -0.96
SCNN1A-218ENST00000542436 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
SCNN1A-218ENST00000542436 NMUP48645 174 aa9.04□□□□□ -0.96
SCNN1A-218ENST00000542436 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
SCNN1A-218ENST00000542436 PFN2P35080 140 aa9.03□□□□□ -0.96
SCNN1A-218ENST00000542436 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
SCNN1A-218ENST00000542436 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
SCNN1A-218ENST00000542436 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
SCNN1A-218ENST00000542436 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
SCNN1A-218ENST00000542436 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
SCNN1A-218ENST00000542436 COX17Q14061 63 aa9.01□□□□□ -0.97
SCNN1A-218ENST00000542436 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
SCNN1A-218ENST00000542436 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
SCNN1A-218ENST00000542436 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 J3QQQ9 107 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 CTAG1AP78358 180 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 PRLHP81277 87 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 FAM19A1Q7Z5A9 133 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 TMEM126AQ9H061 195 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 ERG28Q9UKR5 140 aa9□□□□□ -0.97
SCNN1A-218ENST00000542436 VPREB1P12018 145 aa8.99□□□□□ -0.97
SCNN1A-218ENST00000542436 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
SCNN1A-218ENST00000542436 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
SCNN1A-218ENST00000542436 COX8AP10176 69 aa8.98□□□□□ -0.97
SCNN1A-218ENST00000542436 C14orf144Q96I85 54 aa8.98□□□□□ -0.97
SCNN1A-218ENST00000542436 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
SCNN1A-218ENST00000542436 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
SCNN1A-218ENST00000542436 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
SCNN1A-218ENST00000542436 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 CDIP1Q9H305 208 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 UQCR10Q9UDW1 63 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
SCNN1A-218ENST00000542436 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
SCNN1A-218ENST00000542436 DLEU1O43261 78 aa8.95□□□□□ -0.98
SCNN1A-218ENST00000542436 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
SCNN1A-218ENST00000542436 M0R378 163 aa8.94□□□□□ -0.98
SCNN1A-218ENST00000542436 HERV-K104P63124 156 aa8.94□□□□□ -0.98
SCNN1A-218ENST00000542436 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
SCNN1A-218ENST00000542436 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
SCNN1A-218ENST00000542436 SCGB1D4Q6XE38 83 aa8.93□□□□□ -0.98
SCNN1A-218ENST00000542436 IGLV7-46A0A075B6I9 117 aa8.92□□□□□ -0.98
SCNN1A-218ENST00000542436 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
SCNN1A-218ENST00000542436 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms