RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 C2orf48Q96LS8 159 aa4.63□□□□□ -1.67
NKRF-204ENST00000542113 LOC110117498A0A087WWA1 95 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 FLNBO75369 2602 aaKnown RBP4.62□□□□□ -1.67
NKRF-204ENST00000542113 HIVEP1P15822 2718 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 KRTAP10-3P60369 221 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 TMEM258P61165 79 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 C3orf56Q8N813 242 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 Q8NAQ8 132 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 J3KT08 172 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 BCE1O60756 84 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 LYPD5Q6UWN5 251 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 LAMTOR3Q9UHA4 124 aa4.62□□□□□ -1.67
NKRF-204ENST00000542113 CYSRT1A8MQ03 144 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 PRR3P79522 188 aaKnown RBP4.61□□□□□ -1.67
NKRF-204ENST00000542113 C6orf223Q8N319 242 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 DIRC1Q969H9 104 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 DSCR8Q96T75 97 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 UNC79Q9P2D8 2635 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 TRBV7-6A0A0J9YX20 115 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
NKRF-204ENST00000542113 UNQ6190/PRO20217Q6UXQ8 127 aa4.61□□□□□ -1.67
NKRF-204ENST00000542113 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.6□□□□□ -1.67
NKRF-204ENST00000542113 KLK12Q9UKR0 248 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 H3BNG1 76 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 DEFB4AO15263 64 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 HTN3P15516 51 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
NKRF-204ENST00000542113 Q6ZQT0 140 aa4.6□□□□□ -1.67
NKRF-204ENST00000542113 F8WDY8 70 aa4.59□□□□□ -1.67
NKRF-204ENST00000542113 CELA1Q9UNI1 258 aa4.59□□□□□ -1.67
NKRF-204ENST00000542113 A0A087WVE0 104 aa4.59□□□□□ -1.67
NKRF-204ENST00000542113 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.68
NKRF-204ENST00000542113 C10orf25Q5T742 122 aa4.59□□□□□ -1.68
NKRF-204ENST00000542113 OTOGQ6ZRI0 2925 aa4.59□□□□□ -1.68
NKRF-204ENST00000542113 PKD1L1Q8TDX9 2849 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 TRRAPQ9Y4A5 3859 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 WIPF1O43516 503 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 COX7BP24311 80 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 EGFEM1PQ0D2K5 195 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 UPK3BQ9BT76 320 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 FBN1P35555 2871 aaKnown RBP4.58□□□□□ -1.68
NKRF-204ENST00000542113 Q6ZQY7 126 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 Q8N3U1 123 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 NBEAL1Q6ZS30 2694 aa4.58□□□□□ -1.68
NKRF-204ENST00000542113 ZNF73O43830 326 aaPredicted RBP4.57□□□□□ -1.68
NKRF-204ENST00000542113 ENHOQ6UWT2 76 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 CXCL6P80162 114 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 CAMK2N2Q96S95 79 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 M0R378 163 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 Q8NDZ9 215 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 WFDC9Q8NEX5 89 aa4.57□□□□□ -1.68
NKRF-204ENST00000542113 ELOF1P60002 83 aaKnown RBP4.56□□□□□ -1.68
NKRF-204ENST00000542113 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
NKRF-204ENST00000542113 SMR3AQ99954 134 aa4.56□□□□□ -1.68
NKRF-204ENST00000542113 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
NKRF-204ENST00000542113 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
NKRF-204ENST00000542113 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
NKRF-204ENST00000542113 Q6ZVQ6 151 aa4.55□□□□□ -1.68
NKRF-204ENST00000542113 TRBV7-4A0A0J9YYF1 115 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 HAMPP81172 84 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 INAFM1C9JVW0 142 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 VPREB1P12018 145 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 KPRPQ5T749 579 aaPredicted RBP4.54□□□□□ -1.68
NKRF-204ENST00000542113 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 BAHCC1Q9P281 2608 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 MAST4O15021 2626 aa4.54□□□□□ -1.68
NKRF-204ENST00000542113 F8P00451 2351 aa4.53□□□□□ -1.68
NKRF-204ENST00000542113 SPATA3Q8NHX4 192 aa4.53□□□□□ -1.68
NKRF-204ENST00000542113 STAB1Q9NY15 2570 aa4.52□□□□□ -1.69
NKRF-204ENST00000542113 HIGD2BQ4VC39 106 aa4.52□□□□□ -1.69
NKRF-204ENST00000542113 DPH3Q96FX2 82 aa4.52□□□□□ -1.69
NKRF-204ENST00000542113 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
NKRF-204ENST00000542113 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
NKRF-204ENST00000542113 Q6ZRU5 148 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 LINC00528Q8N1L1 170 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 A0A1B0GW54 56 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 C20orf197Q8N268 126 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 NKAPP1Q8N9T2 125 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 NDUFC1O43677 76 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 C15orf56Q8N910 161 aa4.51□□□□□ -1.69
NKRF-204ENST00000542113 SYCNQ0VAF6 134 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 FAM19A5Q7Z5A7 132 aaPredicted RBP4.5□□□□□ -1.69
NKRF-204ENST00000542113 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 COL6A5A8TX70 2615 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 IGKV2D-24A0A075B6R9 120 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
NKRF-204ENST00000542113 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
NKRF-204ENST00000542113 Q6ZTC4 211 aa4.49□□□□□ -1.69
NKRF-204ENST00000542113 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
NKRF-204ENST00000542113 DHRS4-AS1Q9P1J3 65 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms