RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
AP003559.1-201ENST00000540906 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 TRAV13-2A0A0B4J235 113 aa8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 NCR3O14931 201 aa8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 MUC7Q8TAX7 377 aa8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 RMI2Q96E14 147 aa8.01□□□□□ -1.13
AP003559.1-201ENST00000540906 Q6ZRP5 223 aa8□□□□□ -1.13
AP003559.1-201ENST00000540906 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
AP003559.1-201ENST00000540906 KMT2AQ03164 3969 aa8□□□□□ -1.13
AP003559.1-201ENST00000540906 NBDYA0A0U1RRE5 68 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 NDUFC2O95298 119 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 OR13C6PQ8NH95 151 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
AP003559.1-201ENST00000540906 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
AP003559.1-201ENST00000540906 M0R2N4 97 aa7.98□□□□□ -1.13
AP003559.1-201ENST00000540906 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
AP003559.1-201ENST00000540906 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
AP003559.1-201ENST00000540906 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
AP003559.1-201ENST00000540906 NDUFC2-KCTD14E9PQ53 114 aa7.97□□□□□ -1.13
AP003559.1-201ENST00000540906 RPL28P46779 137 aaKnown RBP7.97□□□□□ -1.13
AP003559.1-201ENST00000540906 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
AP003559.1-201ENST00000540906 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.13
AP003559.1-201ENST00000540906 F8WDY8 70 aa7.96□□□□□ -1.14
AP003559.1-201ENST00000540906 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.14
AP003559.1-201ENST00000540906 LINC01620Q4KN68 170 aa7.96□□□□□ -1.14
AP003559.1-201ENST00000540906 LST1O00453 97 aa7.95□□□□□ -1.14
AP003559.1-201ENST00000540906 VPREB1P12018 145 aa7.95□□□□□ -1.14
AP003559.1-201ENST00000540906 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
AP003559.1-201ENST00000540906 C9JAW5 83 aa7.94□□□□□ -1.14
AP003559.1-201ENST00000540906 F8W1H4 67 aa7.94□□□□□ -1.14
AP003559.1-201ENST00000540906 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
AP003559.1-201ENST00000540906 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
AP003559.1-201ENST00000540906 COX6CP09669 75 aa7.94□□□□□ -1.14
AP003559.1-201ENST00000540906 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
AP003559.1-201ENST00000540906 PSCAO43653 123 aa7.93□□□□□ -1.14
AP003559.1-201ENST00000540906 RNF151Q2KHN1 245 aa7.93□□□□□ -1.14
AP003559.1-201ENST00000540906 SERTAD4-AS1Q5TG53 156 aa7.93□□□□□ -1.14
AP003559.1-201ENST00000540906 A0A087WYN8 130 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 ETDBQ3ZM63 59 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 IGLV6-57P01721 117 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
AP003559.1-201ENST00000540906 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.91□□□□□ -1.14
AP003559.1-201ENST00000540906 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
AP003559.1-201ENST00000540906 SLC25A20O43772 301 aa7.91□□□□□ -1.14
AP003559.1-201ENST00000540906 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 HYDINQ4G0P3 5121 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 C3orf84H3BNL1 204 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 GAGE2BQ13066 116 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 S100A7L2Q5SY68 101 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 Q6ZR54 194 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
AP003559.1-201ENST00000540906 TRBV10-2A0A0K0K1G8 114 aa7.89□□□□□ -1.15
AP003559.1-201ENST00000540906 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
AP003559.1-201ENST00000540906 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
AP003559.1-201ENST00000540906 ANKRD29Q8N6D5 301 aa7.89□□□□□ -1.15
AP003559.1-201ENST00000540906 HECTD4Q9Y4D8 3996 aa7.88□□□□□ -1.15
AP003559.1-201ENST00000540906 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.15
AP003559.1-201ENST00000540906 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
AP003559.1-201ENST00000540906 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
AP003559.1-201ENST00000540906 A0A096LNI7 61 aa7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 LOC107984640A0A0U1RRK4 108 aa7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 M0R378 163 aa7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 LY6G6CO95867 125 aa7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 KMT2CQ8NEZ4 4911 aaKnown RBP7.86□□□□□ -1.15
AP003559.1-201ENST00000540906 TRACP01848 142 aa7.85□□□□□ -1.15
AP003559.1-201ENST00000540906 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
AP003559.1-201ENST00000540906 TRAV23DV6A0A075B6W5 121 aa7.85□□□□□ -1.15
AP003559.1-201ENST00000540906 H0YGX0 51 aa7.85□□□□□ -1.15
AP003559.1-201ENST00000540906 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
AP003559.1-201ENST00000540906 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.15
AP003559.1-201ENST00000540906 TEN1Q86WV5 123 aa7.84□□□□□ -1.15
AP003559.1-201ENST00000540906 FRAS1Q86XX4 4008 aa7.84□□□□□ -1.15
AP003559.1-201ENST00000540906 PLA2G2DQ9UNK4 145 aa7.84□□□□□ -1.15
AP003559.1-201ENST00000540906 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
AP003559.1-201ENST00000540906 M0QXV9 152 aa7.83□□□□□ -1.16
AP003559.1-201ENST00000540906 CHTF8P0CG12 524 aa7.83□□□□□ -1.16
AP003559.1-201ENST00000540906 A0A087WTM6 91 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 H3BT86 120 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 C14orf177Q52M58 125 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 Q8N814 137 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 A0A1W2PNN7 141 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
AP003559.1-201ENST00000540906 TEX49A0A1B0GTD5 131 aa7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 PANO1I0J062 215 aa7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 ZNF73O43830 326 aaPredicted RBP7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 BAALC-AS2P0C853 105 aa7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
AP003559.1-201ENST00000540906 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
AP003559.1-201ENST00000540906 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
AP003559.1-201ENST00000540906 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
AP003559.1-201ENST00000540906 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms