RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 IGKCP01834 107 aa10.4□□□□□ -0.74
CACNA2D4-211ENST00000540728 PFN2P35080 140 aa10.39□□□□□ -0.75
CACNA2D4-211ENST00000540728 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
CACNA2D4-211ENST00000540728 PET117Q6UWS5 81 aa10.39□□□□□ -0.75
CACNA2D4-211ENST00000540728 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
CACNA2D4-211ENST00000540728 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
CACNA2D4-211ENST00000540728 C20orf202A1L168 122 aa10.38□□□□□ -0.75
CACNA2D4-211ENST00000540728 ZNF861PO60384 105 aa10.38□□□□□ -0.75
CACNA2D4-211ENST00000540728 HERVK_113P61574 105 aa10.38□□□□□ -0.75
CACNA2D4-211ENST00000540728 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
CACNA2D4-211ENST00000540728 COX17Q14061 63 aa10.37□□□□□ -0.75
CACNA2D4-211ENST00000540728 HIST3H2BBQ8N257 126 aa10.37□□□□□ -0.75
CACNA2D4-211ENST00000540728 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
CACNA2D4-211ENST00000540728 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
CACNA2D4-211ENST00000540728 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
CACNA2D4-211ENST00000540728 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
CACNA2D4-211ENST00000540728 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
CACNA2D4-211ENST00000540728 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
CACNA2D4-211ENST00000540728 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
CACNA2D4-211ENST00000540728 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
CACNA2D4-211ENST00000540728 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
CACNA2D4-211ENST00000540728 LRP2P98164 4655 aa10.34□□□□□ -0.75
CACNA2D4-211ENST00000540728 BCE1O60756 84 aa10.34□□□□□ -0.75
CACNA2D4-211ENST00000540728 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
CACNA2D4-211ENST00000540728 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
CACNA2D4-211ENST00000540728 HIST1H2BLQ99880 126 aa10.33□□□□□ -0.76
CACNA2D4-211ENST00000540728 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
CACNA2D4-211ENST00000540728 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
CACNA2D4-211ENST00000540728 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
CACNA2D4-211ENST00000540728 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
CACNA2D4-211ENST00000540728 RPL13AP40429 203 aaKnown RBP10.31□□□□□ -0.76
CACNA2D4-211ENST00000540728 LEPROTO15243 131 aa10.3□□□□□ -0.76
CACNA2D4-211ENST00000540728 LGALS3P17931 250 aaKnown RBP10.3□□□□□ -0.76
CACNA2D4-211ENST00000540728 AKR1D1P51857 326 aa10.3□□□□□ -0.76
CACNA2D4-211ENST00000540728 LINC00158P58513 81 aa10.3□□□□□ -0.76
CACNA2D4-211ENST00000540728 C5orf52A6NGY3 159 aa10.29□□□□□ -0.76
CACNA2D4-211ENST00000540728 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
CACNA2D4-211ENST00000540728 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
CACNA2D4-211ENST00000540728 J3QQQ9 107 aa10.28□□□□□ -0.76
CACNA2D4-211ENST00000540728 VPREB1P12018 145 aa10.28□□□□□ -0.76
CACNA2D4-211ENST00000540728 UBE2AP49459 152 aa10.28□□□□□ -0.76
CACNA2D4-211ENST00000540728 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
CACNA2D4-211ENST00000540728 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
CACNA2D4-211ENST00000540728 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
CACNA2D4-211ENST00000540728 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
CACNA2D4-211ENST00000540728 E9PLD3 99 aa10.26□□□□□ -0.77
CACNA2D4-211ENST00000540728 HERV-K104P63124 156 aa10.26□□□□□ -0.77
CACNA2D4-211ENST00000540728 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
CACNA2D4-211ENST00000540728 A0A0U1RRA0 63 aa10.25□□□□□ -0.77
CACNA2D4-211ENST00000540728 NMUP48645 174 aa10.25□□□□□ -0.77
CACNA2D4-211ENST00000540728 TSPEAR-AS2P59090 65 aa10.25□□□□□ -0.77
CACNA2D4-211ENST00000540728 LINC00587B1AMM8 73 aa10.24□□□□□ -0.77
CACNA2D4-211ENST00000540728 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
CACNA2D4-211ENST00000540728 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
CACNA2D4-211ENST00000540728 HSBP1L1C9JCN9 74 aa10.21□□□□□ -0.77
CACNA2D4-211ENST00000540728 CRYGAP11844 174 aa10.21□□□□□ -0.77
CACNA2D4-211ENST00000540728 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.77
CACNA2D4-211ENST00000540728 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
CACNA2D4-211ENST00000540728 RNF213Q63HN8 5207 aa10.21□□□□□ -0.78
CACNA2D4-211ENST00000540728 KRTAP13-1Q8IUC0 172 aa10.2□□□□□ -0.78
CACNA2D4-211ENST00000540728 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
CACNA2D4-211ENST00000540728 M0R378 163 aa10.19□□□□□ -0.78
CACNA2D4-211ENST00000540728 Q8NDZ9 215 aa10.19□□□□□ -0.78
CACNA2D4-211ENST00000540728 PRLHP81277 87 aa10.18□□□□□ -0.78
CACNA2D4-211ENST00000540728 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
CACNA2D4-211ENST00000540728 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
CACNA2D4-211ENST00000540728 IGKV2D-26A0A0A0MRZ7 120 aa10.17□□□□□ -0.78
CACNA2D4-211ENST00000540728 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
CACNA2D4-211ENST00000540728 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
CACNA2D4-211ENST00000540728 TYMSOSQ8TAI1 123 aa10.17□□□□□ -0.78
CACNA2D4-211ENST00000540728 A0A087X002 238 aa10.15□□□□□ -0.78
CACNA2D4-211ENST00000540728 A0A0J9YXY3 114 aa10.14□□□□□ -0.79
CACNA2D4-211ENST00000540728 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
CACNA2D4-211ENST00000540728 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
CACNA2D4-211ENST00000540728 MIEN1Q9BRT3 115 aa10.14□□□□□ -0.79
CACNA2D4-211ENST00000540728 ANAPC11Q9NYG5 84 aa10.14□□□□□ -0.79
CACNA2D4-211ENST00000540728 DAND5Q8N907 189 aa10.13□□□□□ -0.79
CACNA2D4-211ENST00000540728 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
CACNA2D4-211ENST00000540728 NCR3O14931 201 aa10.12□□□□□ -0.79
CACNA2D4-211ENST00000540728 S100A12P80511 92 aa10.12□□□□□ -0.79
CACNA2D4-211ENST00000540728 PRYO14603 147 aa10.11□□□□□ -0.79
CACNA2D4-211ENST00000540728 PRR4Q16378 134 aa10.11□□□□□ -0.79
CACNA2D4-211ENST00000540728 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
CACNA2D4-211ENST00000540728 TSPAN13O95857 204 aa10.1□□□□□ -0.79
CACNA2D4-211ENST00000540728 NPC2P61916 151 aa10.09□□□□□ -0.79
CACNA2D4-211ENST00000540728 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
CACNA2D4-211ENST00000540728 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
CACNA2D4-211ENST00000540728 KCNQ1DNQ9H478 68 aa10.08□□□□□ -0.8
CACNA2D4-211ENST00000540728 LOC107984156A0A0G2JMH3 177 aa10.07□□□□□ -0.8
CACNA2D4-211ENST00000540728 TIMM17BO60830 172 aa10.07□□□□□ -0.8
CACNA2D4-211ENST00000540728 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
CACNA2D4-211ENST00000540728 ARL17AQ8IVW1 177 aa10.07□□□□□ -0.8
CACNA2D4-211ENST00000540728 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
CACNA2D4-211ENST00000540728 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
CACNA2D4-211ENST00000540728 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
CACNA2D4-211ENST00000540728 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
CACNA2D4-211ENST00000540728 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
CACNA2D4-211ENST00000540728 LPAP08519 4548 aa10.05□□□□□ -0.8
CACNA2D4-211ENST00000540728 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
CACNA2D4-211ENST00000540728 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms