RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 AKAP6Q13023 2319 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 UBR3Q6ZT12 1888 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 SAMD9Q5K651 1589 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 TRAV21A0A0B4J279 112 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 PRM1P04553 51 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 ADIRFQ15847 76 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 C9orf62Q8N4C0 152 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 ZNF292O60281 2723 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 NKTRP30414 1462 aaKnown RBP0.08□□□□□ -2.4
MDM2-227ENST00000540709 KIF20BQ96Q89 1820 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 SHPRHQ149N8 1683 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 NCOR2Q9Y618 2525 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 SLIT1O75093 1534 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 LRRC37AA6NMS7 1700 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 CRYBG1Q9Y4K1 1723 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 URB1O60287 2271 aaKnown RBP0.07□□□□□ -2.4
MDM2-227ENST00000540709 SMARCA2P51531 1590 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 A0A087WXM4 84 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 M0R2T5 61 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 NDUFB1O75438 58 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 TDRG1Q3Y452 100 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 WFDC13Q8IUB5 93 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 UNC79Q9P2D8 2635 aa0.07□□□□□ -2.4
MDM2-227ENST00000540709 TTC37Q6PGP7 1564 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 COL14A1Q05707 1796 aaKnown RBP0.06□□□□□ -2.4
MDM2-227ENST00000540709 RGPD4Q7Z3J3 1758 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 MAST4O15021 2626 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 TROQ12816 1431 aaPredicted RBP0.06□□□□□ -2.4
MDM2-227ENST00000540709 UACAQ9BZF9 1416 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 HRNRQ86YZ3 2850 aaPredicted RBP0.06□□□□□ -2.4
MDM2-227ENST00000540709 DEFB135Q30KP9 77 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 LELP1Q5T871 98 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 ST20Q9HBF5 79 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 RGPD3A6NKT7 1758 aaPredicted RBP0.06□□□□□ -2.4
MDM2-227ENST00000540709 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
MDM2-227ENST00000540709 CEP162Q5TB80 1403 aa0.05□□□□□ -2.4
MDM2-227ENST00000540709 MAGI2Q86UL8 1455 aa0.05□□□□□ -2.4
MDM2-227ENST00000540709 PKD1L3Q7Z443 1732 aa0.05□□□□□ -2.4
MDM2-227ENST00000540709 LRRC7Q96NW7 1537 aa0.05□□□□□ -2.4
MDM2-227ENST00000540709 NDUFA3O95167 84 aa0.05□□□□□ -2.4
MDM2-227ENST00000540709 IFI27P40305 119 aaPredicted RBP0.05□□□□□ -2.4
MDM2-227ENST00000540709 SPTBN1Q01082 2364 aaKnown RBP0.05□□□□□ -2.4
MDM2-227ENST00000540709 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
MDM2-227ENST00000540709 ANK2Q01484 3957 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 ATP7BP35670 1465 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 RGPD2P0DJD1 1756 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 NCOR1O75376 2440 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 ABCC3O15438 1527 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 TENM4Q6N022 2769 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 UMAD1C9J7I0 102 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 H0YGG7 62 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 H3BUT2 72 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 SPRR2DP22532 72 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 MYO3AQ8NEV4 1616 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 CSPG4Q6UVK1 2322 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 ZFHX3Q15911 3703 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 HIVEP3Q5T1R4 2406 aa0.04□□□□□ -2.4
MDM2-227ENST00000540709 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
MDM2-227ENST00000540709 LRRC9Q6ZRR7 1453 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 IGSF10Q6WRI0 2623 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 CELSR1Q9NYQ6 3014 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 ABCA2Q9BZC7 2435 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 SMIM13P0DJ93 91 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 DEFA5Q01523 94 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 COX6B2Q6YFQ2 88 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 PRO3102Q9H379 93 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 SUPT6HQ7KZ85 1726 aaKnown RBP0.03□□□□□ -2.4
MDM2-227ENST00000540709 KIAA1551Q9HCM1 1747 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 BCORQ6W2J9 1755 aa0.03□□□□□ -2.4
MDM2-227ENST00000540709 COL7A1Q02388 2944 aa0.03□□□□□ -2.41
MDM2-227ENST00000540709 NCOA2Q15596 1464 aa0.03□□□□□ -2.41
MDM2-227ENST00000540709 CCDC18Q5T9S5 1454 aa0.03□□□□□ -2.41
MDM2-227ENST00000540709 KIF14Q15058 1648 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 UBR5O95071 2799 aaPredicted RBP0.02□□□□□ -2.41
MDM2-227ENST00000540709 PIEZO2Q9H5I5 2752 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 VWFP04275 2813 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 IFI6P09912 130 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 C3orf79P0CE67 100 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 LINC00158P58513 81 aa0.02□□□□□ -2.41
MDM2-227ENST00000540709 URB2Q14146 1524 aaKnown RBP0.02□□□□□ -2.41
MDM2-227ENST00000540709 UBR1Q8IWV7 1749 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 CSMD3Q7Z407 3707 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 NREPQ16612 68 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 BVES-AS1Q5T3Y7 98 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 ATP5EP2Q5VTU8 51 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 ALKQ9UM73 1620 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 RGPD1P0DJD0 1748 aa0.01□□□□□ -2.41
MDM2-227ENST00000540709 PKD1L1Q8TDX9 2849 aa0□□□□□ -2.41
MDM2-227ENST00000540709 H3BVH4 76 aa0□□□□□ -2.41
MDM2-227ENST00000540709 NDUFA4O00483 81 aa0□□□□□ -2.41
MDM2-227ENST00000540709 GPR98Q8WXG9 6306 aa-0□□□□□ -2.41
MDM2-227ENST00000540709 ANKRD17O75179 2603 aaKnown RBP-0□□□□□ -2.41
MDM2-227ENST00000540709 GVINP1Q7Z2Y8 2422 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 RGPD8O14715 1765 aaPredicted RBP-0.01□□□□□ -2.41
MDM2-227ENST00000540709 PPLO60437 1756 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 RGPD5Q99666 1765 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 QSER1Q2KHR3 1735 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 PREX1Q8TCU6 1659 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 MAP3K4Q9Y6R4 1608 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms