RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 TRBV30A0A0K0K1B3 111 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 NCR3O14931 201 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 TCL1BO95988 128 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 MTURNQ8N3F0 131 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
PAAF1-209ENST00000540659 RYR3Q15413 4870 aa6.28□□□□□ -1.4
PAAF1-209ENST00000540659 LCE6AA0A183 80 aa6.28□□□□□ -1.4
PAAF1-209ENST00000540659 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
PAAF1-209ENST00000540659 SYCNQ0VAF6 134 aa6.28□□□□□ -1.4
PAAF1-209ENST00000540659 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 M0R2N4 97 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 COX6CP09669 75 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 DNAH6Q9C0G6 4158 aa6.27□□□□□ -1.41
PAAF1-209ENST00000540659 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
PAAF1-209ENST00000540659 Q8NDZ9 215 aa6.26□□□□□ -1.41
PAAF1-209ENST00000540659 CLEC2BQ92478 149 aa6.26□□□□□ -1.41
PAAF1-209ENST00000540659 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
PAAF1-209ENST00000540659 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
PAAF1-209ENST00000540659 DNAH10Q8IVF4 4471 aa6.26□□□□□ -1.41
PAAF1-209ENST00000540659 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 TRBV20-1A0A075B6N2 111 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 NDUFC2O95298 119 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 WFDC2Q14508 124 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 ATXN8Q156A1 80 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 RNF151Q2KHN1 245 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
PAAF1-209ENST00000540659 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
PAAF1-209ENST00000540659 SLPIP03973 132 aa6.24□□□□□ -1.41
PAAF1-209ENST00000540659 Q6ZRP5 223 aa6.24□□□□□ -1.41
PAAF1-209ENST00000540659 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
PAAF1-209ENST00000540659 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
PAAF1-209ENST00000540659 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
PAAF1-209ENST00000540659 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
PAAF1-209ENST00000540659 C9JAW5 83 aa6.22□□□□□ -1.41
PAAF1-209ENST00000540659 F8W1H4 67 aa6.22□□□□□ -1.41
PAAF1-209ENST00000540659 LY6G6CO95867 125 aa6.22□□□□□ -1.41
PAAF1-209ENST00000540659 RPL28P46779 137 aaKnown RBP6.22□□□□□ -1.41
PAAF1-209ENST00000540659 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
PAAF1-209ENST00000540659 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
PAAF1-209ENST00000540659 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
PAAF1-209ENST00000540659 PRO0461Q9UI25 63 aa6.21□□□□□ -1.42
PAAF1-209ENST00000540659 LST1O00453 97 aa6.2□□□□□ -1.42
PAAF1-209ENST00000540659 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
PAAF1-209ENST00000540659 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
PAAF1-209ENST00000540659 TMEM126AQ9H061 195 aa6.2□□□□□ -1.42
PAAF1-209ENST00000540659 SLC25A20O43772 301 aa6.19□□□□□ -1.42
PAAF1-209ENST00000540659 SNCGO76070 127 aa6.19□□□□□ -1.42
PAAF1-209ENST00000540659 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
PAAF1-209ENST00000540659 VPREB1P12018 145 aa6.19□□□□□ -1.42
PAAF1-209ENST00000540659 FAM218AQ96MZ4 157 aa6.19□□□□□ -1.42
PAAF1-209ENST00000540659 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
PAAF1-209ENST00000540659 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
PAAF1-209ENST00000540659 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
PAAF1-209ENST00000540659 A0A087WYN8 130 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 TRBV10-3A0A0K0K1G6 114 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 TRBV10-2A0A0K0K1G8 114 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 LRCOL1A6NCL2 159 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 M0R378 163 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
PAAF1-209ENST00000540659 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
PAAF1-209ENST00000540659 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
PAAF1-209ENST00000540659 TRAV23DV6A0A075B6W5 121 aa6.16□□□□□ -1.42
PAAF1-209ENST00000540659 H0YGX0 51 aa6.16□□□□□ -1.42
PAAF1-209ENST00000540659 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
PAAF1-209ENST00000540659 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.42
PAAF1-209ENST00000540659 Q6ZR54 194 aa6.15□□□□□ -1.42
PAAF1-209ENST00000540659 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.42
PAAF1-209ENST00000540659 ANKRD29Q8N6D5 301 aa6.15□□□□□ -1.42
PAAF1-209ENST00000540659 A0A096LNI7 61 aa6.14□□□□□ -1.43
PAAF1-209ENST00000540659 DNAL4O96015 105 aa6.14□□□□□ -1.43
PAAF1-209ENST00000540659 TRACP01848 142 aa6.14□□□□□ -1.43
PAAF1-209ENST00000540659 OCIAD2Q56VL3 154 aa6.14□□□□□ -1.43
PAAF1-209ENST00000540659 Q8N814 137 aa6.14□□□□□ -1.43
PAAF1-209ENST00000540659 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
PAAF1-209ENST00000540659 DIRC1Q969H9 104 aa6.13□□□□□ -1.43
PAAF1-209ENST00000540659 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
PAAF1-209ENST00000540659 A0A087WTM6 91 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 RPL37AP8A6NKH3 93 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 H3BT86 120 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 GHRHP01286 108 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
PAAF1-209ENST00000540659 DNAH2Q9P225 4427 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 C22orf24Q9Y442 160 aa6.12□□□□□ -1.43
PAAF1-209ENST00000540659 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
PAAF1-209ENST00000540659 BAALC-AS2P0C853 105 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 LINC00336Q6ZUF6 198 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 TEN1Q86WV5 123 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
PAAF1-209ENST00000540659 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms