RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 A0A1B0GWB2 263 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 COX17Q14061 63 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 CARD19Q96LW7 228 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
CDH19-203ENST00000540086 DNAH6Q9C0G6 4158 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 COPS9Q8WXC6 57 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
CDH19-203ENST00000540086 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
CDH19-203ENST00000540086 A0A1B0GV90 55 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 F8WDY8 70 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
CDH19-203ENST00000540086 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
CDH19-203ENST00000540086 A0A0B4J2C4 111 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 XAGE1AQ9HD64 81 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 H7C2G1 150 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 Q8NDZ9 215 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
CDH19-203ENST00000540086 DNAH2Q9P225 4427 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 H3BUT2 72 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
CDH19-203ENST00000540086 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
CDH19-203ENST00000540086 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 Q6ZRP5 223 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
CDH19-203ENST00000540086 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 TSPAN13O95857 204 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
CDH19-203ENST00000540086 RNF151Q2KHN1 245 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 A0A087WTM6 91 aa4.47□□□□□ -1.69
CDH19-203ENST00000540086 CNBPP62633 177 aaKnown RBP4.47□□□□□ -1.69
CDH19-203ENST00000540086 NCR3O14931 201 aa4.46□□□□□ -1.7
CDH19-203ENST00000540086 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
CDH19-203ENST00000540086 Q1RN00 199 aa4.46□□□□□ -1.7
CDH19-203ENST00000540086 Q8N814 137 aa4.46□□□□□ -1.7
CDH19-203ENST00000540086 A0A1W2PPM0 123 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
CDH19-203ENST00000540086 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CDH19-203ENST00000540086 TRAV13-2A0A0B4J235 113 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 NDUFC2O95298 119 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 VAMP3Q15836 100 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 OR13C6PQ8NH95 151 aa4.45□□□□□ -1.7
CDH19-203ENST00000540086 RTL8CO15255 209 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 FABP2P12104 132 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 PSMB2P49721 201 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 IGKV2-24A0A0C4DH68 120 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 LCE6AA0A183 80 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 GAGE10A6NGK3 116 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 VPREB1P12018 145 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
CDH19-203ENST00000540086 A0A096LNI7 61 aa4.43□□□□□ -1.7
CDH19-203ENST00000540086 TRIAP1O43715 76 aa4.43□□□□□ -1.7
CDH19-203ENST00000540086 C9orf163Q8N9P6 203 aa4.43□□□□□ -1.7
CDH19-203ENST00000540086 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
CDH19-203ENST00000540086 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 SCGB1C2P0DMR2 95 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 SPCS1Q9Y6A9 102 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 C16orf90A8MZG2 172 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
CDH19-203ENST00000540086 SMIM11BQ8TCY0 68 aa4.42□□□□□ -1.7
CDH19-203ENST00000540086 TRBV10-3A0A0K0K1G6 114 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 K7EP34 96 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 SDIM1Q6ZPB5 146 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
CDH19-203ENST00000540086 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.7
CDH19-203ENST00000540086 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.7
CDH19-203ENST00000540086 M0R378 163 aa4.4□□□□□ -1.7
CDH19-203ENST00000540086 RPL28P46779 137 aaKnown RBP4.4□□□□□ -1.7
CDH19-203ENST00000540086 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.7
CDH19-203ENST00000540086 RYR2Q92736 4967 aa4.4□□□□□ -1.7
CDH19-203ENST00000540086 PANO1I0J062 215 aa4.4□□□□□ -1.71
CDH19-203ENST00000540086 TCL1BO95988 128 aa4.4□□□□□ -1.71
CDH19-203ENST00000540086 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
CDH19-203ENST00000540086 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
CDH19-203ENST00000540086 CLEC2BQ92478 149 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms