RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAF3-204ENST00000539721 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
TRAF3-204ENST00000539721 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
TRAF3-204ENST00000539721 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
TRAF3-204ENST00000539721 K7ERJ3 54 aa10.39□□□□□ -0.75
TRAF3-204ENST00000539721 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
TRAF3-204ENST00000539721 CFC1P0CG37 223 aa10.39□□□□□ -0.75
TRAF3-204ENST00000539721 C9orf129Q5T035 196 aaKnown RBP10.39□□□□□ -0.75
TRAF3-204ENST00000539721 RAB37Q96AX2 223 aa10.38□□□□□ -0.75
TRAF3-204ENST00000539721 RYR2Q92736 4967 aa10.38□□□□□ -0.75
TRAF3-204ENST00000539721 A0A096LNI7 61 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 NDUFC2O95298 119 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 Q8NDZ9 215 aa10.37□□□□□ -0.75
TRAF3-204ENST00000539721 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
TRAF3-204ENST00000539721 HECTD4Q9Y4D8 3996 aa10.36□□□□□ -0.75
TRAF3-204ENST00000539721 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
TRAF3-204ENST00000539721 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
TRAF3-204ENST00000539721 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 NCR3O14931 201 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
TRAF3-204ENST00000539721 FAT2Q9NYQ8 4349 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 PRO1854Q9UHT4 67 aa10.34□□□□□ -0.75
TRAF3-204ENST00000539721 VPREB1P12018 145 aa10.33□□□□□ -0.76
TRAF3-204ENST00000539721 TRAV13-2A0A0B4J235 113 aa10.32□□□□□ -0.76
TRAF3-204ENST00000539721 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
TRAF3-204ENST00000539721 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
TRAF3-204ENST00000539721 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
TRAF3-204ENST00000539721 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
TRAF3-204ENST00000539721 FAM168BA1KXE4 195 aa10.31□□□□□ -0.76
TRAF3-204ENST00000539721 RPL13AP40429 203 aaKnown RBP10.31□□□□□ -0.76
TRAF3-204ENST00000539721 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
TRAF3-204ENST00000539721 DNAH11Q96DT5 4516 aa10.31□□□□□ -0.76
TRAF3-204ENST00000539721 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
TRAF3-204ENST00000539721 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
TRAF3-204ENST00000539721 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
TRAF3-204ENST00000539721 H7C2G1 150 aa10.3□□□□□ -0.76
TRAF3-204ENST00000539721 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
TRAF3-204ENST00000539721 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
TRAF3-204ENST00000539721 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
TRAF3-204ENST00000539721 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
TRAF3-204ENST00000539721 Q1RN00 199 aa10.29□□□□□ -0.76
TRAF3-204ENST00000539721 M0R378 163 aa10.28□□□□□ -0.76
TRAF3-204ENST00000539721 S100A7L2Q5SY68 101 aa10.28□□□□□ -0.76
TRAF3-204ENST00000539721 IGLV5-37A0A075B6J1 123 aa10.27□□□□□ -0.77
TRAF3-204ENST00000539721 PANO1I0J062 215 aa10.27□□□□□ -0.77
TRAF3-204ENST00000539721 TSPAN13O95857 204 aa10.27□□□□□ -0.77
TRAF3-204ENST00000539721 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
TRAF3-204ENST00000539721 KRTAP7-1Q8IUC3 87 aa10.26□□□□□ -0.77
TRAF3-204ENST00000539721 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
TRAF3-204ENST00000539721 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
TRAF3-204ENST00000539721 PKD1P98161 4303 aa10.26□□□□□ -0.77
TRAF3-204ENST00000539721 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
TRAF3-204ENST00000539721 NAA38Q9BRA0 125 aaKnown RBP10.26□□□□□ -0.77
TRAF3-204ENST00000539721 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
TRAF3-204ENST00000539721 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
TRAF3-204ENST00000539721 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
TRAF3-204ENST00000539721 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 GAGE10A6NGK3 116 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 H3BUT2 72 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 M0QXV9 152 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 C7orf33Q8WU49 177 aa10.24□□□□□ -0.77
TRAF3-204ENST00000539721 A0A1B0GVY2 172 aa10.23□□□□□ -0.77
TRAF3-204ENST00000539721 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
TRAF3-204ENST00000539721 PSMB2P49721 201 aa10.22□□□□□ -0.77
TRAF3-204ENST00000539721 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
TRAF3-204ENST00000539721 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.77
TRAF3-204ENST00000539721 KRTAP10-1P60331 282 aa10.21□□□□□ -0.78
TRAF3-204ENST00000539721 LINC00167Q96N53 147 aa10.21□□□□□ -0.78
TRAF3-204ENST00000539721 A0A087WYN8 130 aa10.2□□□□□ -0.78
TRAF3-204ENST00000539721 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
TRAF3-204ENST00000539721 TRAV23DV6A0A075B6W5 121 aa10.19□□□□□ -0.78
TRAF3-204ENST00000539721 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
TRAF3-204ENST00000539721 TRIAP1O43715 76 aa10.19□□□□□ -0.78
TRAF3-204ENST00000539721 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
TRAF3-204ENST00000539721 RYR3Q15413 4870 aa10.18□□□□□ -0.78
TRAF3-204ENST00000539721 A0A1W2PPM0 123 aa10.18□□□□□ -0.78
TRAF3-204ENST00000539721 CBY1Q9Y3M2 126 aa10.18□□□□□ -0.78
TRAF3-204ENST00000539721 IGLV1-50A0A075B6I6 118 aa10.17□□□□□ -0.78
TRAF3-204ENST00000539721 FAM30AQ9NZY2 134 aa10.17□□□□□ -0.78
TRAF3-204ENST00000539721 SCGB1C2P0DMR2 95 aa10.16□□□□□ -0.78
TRAF3-204ENST00000539721 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
TRAF3-204ENST00000539721 EPM2AB3EWF7 344 aa10.16□□□□□ -0.78
TRAF3-204ENST00000539721 COX6CP09669 75 aa10.16□□□□□ -0.78
TRAF3-204ENST00000539721 FABP2P12104 132 aa10.15□□□□□ -0.78
TRAF3-204ENST00000539721 UBE2BP63146 152 aa10.15□□□□□ -0.78
TRAF3-204ENST00000539721 Q6ZSA8 131 aa10.15□□□□□ -0.78
TRAF3-204ENST00000539721 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
TRAF3-204ENST00000539721 A0A1B0GV90 55 aa10.14□□□□□ -0.79
TRAF3-204ENST00000539721 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
TRAF3-204ENST00000539721 LYRM7Q5U5X0 104 aa10.14□□□□□ -0.79
TRAF3-204ENST00000539721 DNAH8Q96JB1 4490 aa10.14□□□□□ -0.79
TRAF3-204ENST00000539721 PRYO14603 147 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms