RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
DDB1-215ENST00000539712 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
DDB1-215ENST00000539712 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
DDB1-215ENST00000539712 S100A1P23297 94 aa9.89□□□□□ -0.83
DDB1-215ENST00000539712 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
DDB1-215ENST00000539712 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
DDB1-215ENST00000539712 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
DDB1-215ENST00000539712 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
DDB1-215ENST00000539712 LINC00310P59036 64 aa9.87□□□□□ -0.83
DDB1-215ENST00000539712 M0R378 163 aa9.86□□□□□ -0.83
DDB1-215ENST00000539712 TRGC2P03986 189 aa9.86□□□□□ -0.83
DDB1-215ENST00000539712 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
DDB1-215ENST00000539712 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
DDB1-215ENST00000539712 TMEM126AQ9H061 195 aa9.86□□□□□ -0.83
DDB1-215ENST00000539712 CRYGAP11844 174 aa9.85□□□□□ -0.83
DDB1-215ENST00000539712 UBE2AP49459 152 aa9.85□□□□□ -0.83
DDB1-215ENST00000539712 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
DDB1-215ENST00000539712 LINC00158P58513 81 aa9.84□□□□□ -0.83
DDB1-215ENST00000539712 PRLHP81277 87 aa9.84□□□□□ -0.83
DDB1-215ENST00000539712 HSBP1O75506 76 aa9.83□□□□□ -0.84
DDB1-215ENST00000539712 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
DDB1-215ENST00000539712 SERF1AO75920 110 aa9.81□□□□□ -0.84
DDB1-215ENST00000539712 TSPAN13O95857 204 aa9.81□□□□□ -0.84
DDB1-215ENST00000539712 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
DDB1-215ENST00000539712 FAM19A1Q7Z5A9 133 aa9.81□□□□□ -0.84
DDB1-215ENST00000539712 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
DDB1-215ENST00000539712 MUC2Q02817 5179 aa9.8□□□□□ -0.84
DDB1-215ENST00000539712 PRR4Q16378 134 aa9.8□□□□□ -0.84
DDB1-215ENST00000539712 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
DDB1-215ENST00000539712 COLCA2A8K830 154 aa9.79□□□□□ -0.84
DDB1-215ENST00000539712 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
DDB1-215ENST00000539712 TSPEAR-AS2P59090 65 aa9.78□□□□□ -0.84
DDB1-215ENST00000539712 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
DDB1-215ENST00000539712 MIR7-3HGQ8N6C7 128 aa9.77□□□□□ -0.85
DDB1-215ENST00000539712 NDUFA12Q9UI09 145 aa9.77□□□□□ -0.85
DDB1-215ENST00000539712 H0Y8G0 127 aa9.76□□□□□ -0.85
DDB1-215ENST00000539712 HERV-K104P63124 156 aa9.76□□□□□ -0.85
DDB1-215ENST00000539712 BOD1L2Q8IYS8 172 aa9.75□□□□□ -0.85
DDB1-215ENST00000539712 MEIG1Q5JSS6 88 aa9.74□□□□□ -0.85
DDB1-215ENST00000539712 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
DDB1-215ENST00000539712 LEPROTO15243 131 aa9.73□□□□□ -0.85
DDB1-215ENST00000539712 SPRR1AP35321 89 aa9.73□□□□□ -0.85
DDB1-215ENST00000539712 LOC107984156A0A0G2JMH3 177 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
DDB1-215ENST00000539712 NCR3O14931 201 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 FABP4P15090 132 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 PLNP26678 52 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 ARL17AQ8IVW1 177 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 KCNQ1DNQ9H478 68 aa9.72□□□□□ -0.85
DDB1-215ENST00000539712 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
DDB1-215ENST00000539712 LINC00304Q8N9R0 145 aa9.71□□□□□ -0.86
DDB1-215ENST00000539712 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
DDB1-215ENST00000539712 LINC00587B1AMM8 73 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 PRYO14603 147 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 DPM2O94777 84 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 DAND5Q8N907 189 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 SPRR4Q96PI1 79 aa9.7□□□□□ -0.86
DDB1-215ENST00000539712 TRBV10-3A0A0K0K1G6 114 aa9.69□□□□□ -0.86
DDB1-215ENST00000539712 J3QQQ9 107 aa9.69□□□□□ -0.86
DDB1-215ENST00000539712 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
DDB1-215ENST00000539712 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
DDB1-215ENST00000539712 IGKCP01834 107 aa9.67□□□□□ -0.86
DDB1-215ENST00000539712 RETNLBQ9BQ08 111 aa9.67□□□□□ -0.86
DDB1-215ENST00000539712 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
DDB1-215ENST00000539712 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.86
DDB1-215ENST00000539712 SMCR5Q8TEV8 140 aa9.65□□□□□ -0.86
DDB1-215ENST00000539712 NMUP48645 174 aa9.64□□□□□ -0.87
DDB1-215ENST00000539712 CTAG1AP78358 180 aa9.64□□□□□ -0.87
DDB1-215ENST00000539712 KRTAP4-8Q9BYQ9 185 aa9.64□□□□□ -0.87
DDB1-215ENST00000539712 MUC17Q685J3 4493 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 B5MCH6 92 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HERVK_113P61574 105 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
DDB1-215ENST00000539712 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
DDB1-215ENST00000539712 LGALS3P17931 250 aaKnown RBP9.62□□□□□ -0.87
DDB1-215ENST00000539712 A0A0J9YXY3 114 aa9.61□□□□□ -0.87
DDB1-215ENST00000539712 ETDCA0A1B0GVM5 59 aa9.61□□□□□ -0.87
DDB1-215ENST00000539712 E9PLD3 99 aa9.61□□□□□ -0.87
DDB1-215ENST00000539712 ERC2-IT1O76042 136 aa9.61□□□□□ -0.87
DDB1-215ENST00000539712 ZNF706Q9Y5V0 76 aaPredicted RBP9.61□□□□□ -0.87
DDB1-215ENST00000539712 SYS1-DBNDD2H3BUS1 97 aa9.6□□□□□ -0.87
DDB1-215ENST00000539712 IGLV6-57P01721 117 aa9.6□□□□□ -0.87
DDB1-215ENST00000539712 DDTP30046 118 aa9.6□□□□□ -0.87
DDB1-215ENST00000539712 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
DDB1-215ENST00000539712 NDUFC2O95298 119 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms