RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SONP18583 2426 aaKnown RBP8.96□□□□□ -0.98
UBE3B-209ENST00000539584 JMJD1CQ15652 2540 aa8.96□□□□□ -0.98
UBE3B-209ENST00000539584 CENPEQ02224 2701 aa8.96□□□□□ -0.98
UBE3B-209ENST00000539584 C10orf25Q5T742 122 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 NBPF19A0A087WUL8 3843 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 LOC107984640A0A0U1RRK4 108 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-209ENST00000539584 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 Q8NAQ8 132 aa8.95□□□□□ -0.98
UBE3B-209ENST00000539584 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
UBE3B-209ENST00000539584 APCP25054 2843 aa8.94□□□□□ -0.98
UBE3B-209ENST00000539584 Q6ZQY7 126 aa8.93□□□□□ -0.98
UBE3B-209ENST00000539584 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
UBE3B-209ENST00000539584 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
UBE3B-209ENST00000539584 Q8N3U1 123 aa8.93□□□□□ -0.98
UBE3B-209ENST00000539584 USP24Q9UPU5 2620 aa8.92□□□□□ -0.98
UBE3B-209ENST00000539584 KLK12Q9UKR0 248 aa8.92□□□□□ -0.98
UBE3B-209ENST00000539584 Q6ZVQ6 151 aa8.92□□□□□ -0.98
UBE3B-209ENST00000539584 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
UBE3B-209ENST00000539584 ZNF73O43830 326 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-209ENST00000539584 COX7BP24311 80 aa8.91□□□□□ -0.98
UBE3B-209ENST00000539584 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
UBE3B-209ENST00000539584 H3BNG1 76 aa8.9□□□□□ -0.98
UBE3B-209ENST00000539584 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
UBE3B-209ENST00000539584 C6orf48Q9UBA6 75 aa8.9□□□□□ -0.98
UBE3B-209ENST00000539584 DEFB4AO15263 64 aa8.9□□□□□ -0.99
UBE3B-209ENST00000539584 CELA1Q9UNI1 258 aa8.9□□□□□ -0.99
UBE3B-209ENST00000539584 F8WDY8 70 aa8.89□□□□□ -0.99
UBE3B-209ENST00000539584 EGFEM1PQ0D2K5 195 aa8.89□□□□□ -0.99
UBE3B-209ENST00000539584 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
UBE3B-209ENST00000539584 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
UBE3B-209ENST00000539584 M0R378 163 aa8.88□□□□□ -0.99
UBE3B-209ENST00000539584 HAMPP81172 84 aa8.88□□□□□ -0.99
UBE3B-209ENST00000539584 NF1P21359 2839 aa8.87□□□□□ -0.99
UBE3B-209ENST00000539584 KLKP1Q107X0 134 aa8.87□□□□□ -0.99
UBE3B-209ENST00000539584 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
UBE3B-209ENST00000539584 ZFYVE26Q68DK2 2539 aa8.87□□□□□ -0.99
UBE3B-209ENST00000539584 C20orf197Q8N268 126 aa8.87□□□□□ -0.99
UBE3B-209ENST00000539584 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
UBE3B-209ENST00000539584 CCDC168Q8NDH2 2452 aa8.86□□□□□ -0.99
UBE3B-209ENST00000539584 VPREB1P12018 145 aa8.86□□□□□ -0.99
UBE3B-209ENST00000539584 WIPF1O43516 503 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 CAMK2N2Q96S95 79 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 CUBNO60494 3623 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 HTN3P15516 51 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
UBE3B-209ENST00000539584 NDUFC1O43677 76 aa8.84□□□□□ -0.99
UBE3B-209ENST00000539584 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
UBE3B-209ENST00000539584 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
UBE3B-209ENST00000539584 M0R2N4 97 aa8.83□□□□□ -1
UBE3B-209ENST00000539584 FAM236CP0DP71 79 aa8.83□□□□□ -1
UBE3B-209ENST00000539584 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
UBE3B-209ENST00000539584 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
UBE3B-209ENST00000539584 H7BZZ5 65 aa8.81□□□□□ -1
UBE3B-209ENST00000539584 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
UBE3B-209ENST00000539584 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
UBE3B-209ENST00000539584 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -1
UBE3B-209ENST00000539584 A0A1B0GW54 56 aa8.8□□□□□ -1
UBE3B-209ENST00000539584 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
UBE3B-209ENST00000539584 EPM2AB3EWF7 344 aa8.8□□□□□ -1
UBE3B-209ENST00000539584 ERC2-IT1O76042 136 aa8.8□□□□□ -1
UBE3B-209ENST00000539584 J3QKU1 62 aa8.79□□□□□ -1
UBE3B-209ENST00000539584 PDZD2O15018 2839 aa8.78□□□□□ -1
UBE3B-209ENST00000539584 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
UBE3B-209ENST00000539584 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
UBE3B-209ENST00000539584 OXTP01178 125 aa8.78□□□□□ -1
UBE3B-209ENST00000539584 Q6ZRU5 148 aa8.78□□□□□ -1
UBE3B-209ENST00000539584 SMR3AQ99954 134 aa8.78□□□□□ -1
UBE3B-209ENST00000539584 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1.01
UBE3B-209ENST00000539584 HIVEP2P31629 2446 aa8.77□□□□□ -1.01
UBE3B-209ENST00000539584 HIGD2BQ4VC39 106 aa8.76□□□□□ -1.01
UBE3B-209ENST00000539584 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
UBE3B-209ENST00000539584 WFDC10BQ8IUB3 73 aa8.76□□□□□ -1.01
UBE3B-209ENST00000539584 C1orf43Q9BWL3 253 aa8.76□□□□□ -1.01
UBE3B-209ENST00000539584 MTORP42345 2549 aa8.76□□□□□ -1.01
UBE3B-209ENST00000539584 KCNQ1DNQ9H478 68 aa8.75□□□□□ -1.01
UBE3B-209ENST00000539584 ACANP16112 2415 aa8.75□□□□□ -1.01
UBE3B-209ENST00000539584 LINC01556Q5JQF7 62 aa8.74□□□□□ -1.01
UBE3B-209ENST00000539584 Q5XG85 94 aa8.74□□□□□ -1.01
UBE3B-209ENST00000539584 NREPQ16612 68 aa8.73□□□□□ -1.01
UBE3B-209ENST00000539584 BPY2O14599 106 aa8.73□□□□□ -1.01
UBE3B-209ENST00000539584 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
UBE3B-209ENST00000539584 GCN1Q92616 2671 aaKnown RBP8.72□□□□□ -1.01
UBE3B-209ENST00000539584 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
UBE3B-209ENST00000539584 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
UBE3B-209ENST00000539584 Q6ZRP5 223 aa8.72□□□□□ -1.01
UBE3B-209ENST00000539584 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.01
UBE3B-209ENST00000539584 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.01
UBE3B-209ENST00000539584 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.01
UBE3B-209ENST00000539584 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
UBE3B-209ENST00000539584 INAFM1C9JVW0 142 aa8.7□□□□□ -1.02
UBE3B-209ENST00000539584 F8WEM9 126 aa8.7□□□□□ -1.02
UBE3B-209ENST00000539584 RMI2Q96E14 147 aa8.7□□□□□ -1.02
UBE3B-209ENST00000539584 ESRGQ1W209 222 aa8.69□□□□□ -1.02
UBE3B-209ENST00000539584 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
UBE3B-209ENST00000539584 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 SCXQ7RTU7 201 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms