RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PCSK5Q92824 1860 aa10.07□□□□□ -0.8
CACNB1-206ENST00000539338 PRYO14603 147 aa10.07□□□□□ -0.8
CACNB1-206ENST00000539338 SERP1Q9Y6X1 66 aa10.07□□□□□ -0.8
CACNB1-206ENST00000539338 ACANP16112 2415 aa10.06□□□□□ -0.8
CACNB1-206ENST00000539338 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
CACNB1-206ENST00000539338 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
CACNB1-206ENST00000539338 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
CACNB1-206ENST00000539338 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
CACNB1-206ENST00000539338 PRLHP81277 87 aa10.05□□□□□ -0.8
CACNB1-206ENST00000539338 ANKRD17O75179 2603 aaKnown RBP10.05□□□□□ -0.8
CACNB1-206ENST00000539338 IGHV6-1A0A0B4J1U7 121 aa10.05□□□□□ -0.8
CACNB1-206ENST00000539338 PRR15LQ9BU68 103 aa10.04□□□□□ -0.8
CACNB1-206ENST00000539338 LINC01556Q5JQF7 62 aa10.03□□□□□ -0.8
CACNB1-206ENST00000539338 F8WDY8 70 aa10.03□□□□□ -0.8
CACNB1-206ENST00000539338 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
CACNB1-206ENST00000539338 PCNTO95613 3336 aa10.01□□□□□ -0.81
CACNB1-206ENST00000539338 TMEM254Q8TBM7 123 aa10.01□□□□□ -0.81
CACNB1-206ENST00000539338 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
CACNB1-206ENST00000539338 PCOTHQ58A44 107 aa10□□□□□ -0.81
CACNB1-206ENST00000539338 MUC4Q99102 2169 aa10□□□□□ -0.81
CACNB1-206ENST00000539338 NBDYA0A0U1RRE5 68 aa10□□□□□ -0.81
CACNB1-206ENST00000539338 X6R8D5 127 aa10□□□□□ -0.81
CACNB1-206ENST00000539338 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
CACNB1-206ENST00000539338 K7EIL1 84 aa9.99□□□□□ -0.81
CACNB1-206ENST00000539338 RETNLBQ9BQ08 111 aa9.98□□□□□ -0.81
CACNB1-206ENST00000539338 HECTD1Q9ULT8 2610 aa9.97□□□□□ -0.81
CACNB1-206ENST00000539338 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
CACNB1-206ENST00000539338 BPTFQ12830 3046 aa9.96□□□□□ -0.81
CACNB1-206ENST00000539338 HCG22E2RYF7 251 aa9.96□□□□□ -0.82
CACNB1-206ENST00000539338 H0Y9P7 68 aa9.96□□□□□ -0.82
CACNB1-206ENST00000539338 CXCL6P80162 114 aa9.96□□□□□ -0.82
CACNB1-206ENST00000539338 K7ERS5 55 aa9.96□□□□□ -0.82
CACNB1-206ENST00000539338 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
CACNB1-206ENST00000539338 H3BNG1 76 aa9.94□□□□□ -0.82
CACNB1-206ENST00000539338 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
CACNB1-206ENST00000539338 PSPHP1O15172 72 aa9.94□□□□□ -0.82
CACNB1-206ENST00000539338 TRBV7-6A0A0J9YX20 115 aa9.94□□□□□ -0.82
CACNB1-206ENST00000539338 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
CACNB1-206ENST00000539338 LITAFQ99732 161 aa9.93□□□□□ -0.82
CACNB1-206ENST00000539338 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
CACNB1-206ENST00000539338 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
CACNB1-206ENST00000539338 ELOF1P60002 83 aaKnown RBP9.89□□□□□ -0.83
CACNB1-206ENST00000539338 Q6ZQT0 140 aa9.87□□□□□ -0.83
CACNB1-206ENST00000539338 C5orf42Q9H799 3197 aa9.86□□□□□ -0.83
CACNB1-206ENST00000539338 RTL8CO15255 209 aa9.86□□□□□ -0.83
CACNB1-206ENST00000539338 CRYGAP11844 174 aa9.86□□□□□ -0.83
CACNB1-206ENST00000539338 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
CACNB1-206ENST00000539338 Q8NAQ8 132 aa9.86□□□□□ -0.83
CACNB1-206ENST00000539338 RPL37AP61513 92 aaKnown RBP9.86□□□□□ -0.83
CACNB1-206ENST00000539338 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
CACNB1-206ENST00000539338 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
CACNB1-206ENST00000539338 SPINK1P00995 79 aa9.83□□□□□ -0.84
CACNB1-206ENST00000539338 KRTAP21-3Q3LHN1 58 aa9.83□□□□□ -0.84
CACNB1-206ENST00000539338 ST20-AS1Q8NBB2 130 aa9.82□□□□□ -0.84
CACNB1-206ENST00000539338 hDV103S1A0JD37 113 aa9.82□□□□□ -0.84
CACNB1-206ENST00000539338 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
CACNB1-206ENST00000539338 Q6ZRX8 168 aa9.81□□□□□ -0.84
CACNB1-206ENST00000539338 LOC110117498A0A087WWA1 95 aa9.81□□□□□ -0.84
CACNB1-206ENST00000539338 CHD7Q9P2D1 2997 aa9.81□□□□□ -0.84
CACNB1-206ENST00000539338 Q6ZRP5 223 aa9.8□□□□□ -0.84
CACNB1-206ENST00000539338 PHF5AQ7RTV0 110 aaKnown RBP9.8□□□□□ -0.84
CACNB1-206ENST00000539338 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
CACNB1-206ENST00000539338 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
CACNB1-206ENST00000539338 MOBPQ13875 183 aa9.79□□□□□ -0.84
CACNB1-206ENST00000539338 Q8NBF4 154 aa9.78□□□□□ -0.84
CACNB1-206ENST00000539338 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
CACNB1-206ENST00000539338 A0A096LNT2 108 aa9.77□□□□□ -0.85
CACNB1-206ENST00000539338 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
CACNB1-206ENST00000539338 TM2D3Q9BRN9 247 aa9.77□□□□□ -0.85
CACNB1-206ENST00000539338 KRTAP10-11P60412 298 aa9.76□□□□□ -0.85
CACNB1-206ENST00000539338 C19orf73Q9NVV2 129 aa9.75□□□□□ -0.85
CACNB1-206ENST00000539338 BCE1O60756 84 aa9.75□□□□□ -0.85
CACNB1-206ENST00000539338 VPREB1P12018 145 aa9.75□□□□□ -0.85
CACNB1-206ENST00000539338 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
CACNB1-206ENST00000539338 KRTAP1-3Q8IUG1 177 aa9.74□□□□□ -0.85
CACNB1-206ENST00000539338 IGLV6-57P01721 117 aa9.74□□□□□ -0.85
CACNB1-206ENST00000539338 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
CACNB1-206ENST00000539338 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
CACNB1-206ENST00000539338 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
CACNB1-206ENST00000539338 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
CACNB1-206ENST00000539338 CHTF8P0CG12 524 aa9.73□□□□□ -0.85
CACNB1-206ENST00000539338 A0A1B0GW54 56 aa9.71□□□□□ -0.86
CACNB1-206ENST00000539338 SPACA4Q8TDM5 124 aa9.7□□□□□ -0.86
CACNB1-206ENST00000539338 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
CACNB1-206ENST00000539338 GIG44P09565 113 aaPredicted RBP9.7□□□□□ -0.86
CACNB1-206ENST00000539338 KRTAP1-1Q07627 177 aa9.7□□□□□ -0.86
CACNB1-206ENST00000539338 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
CACNB1-206ENST00000539338 RPS28P62857 69 aaKnown RBP9.68□□□□□ -0.86
CACNB1-206ENST00000539338 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
CACNB1-206ENST00000539338 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
CACNB1-206ENST00000539338 TYMSOSQ8TAI1 123 aa9.66□□□□□ -0.86
CACNB1-206ENST00000539338 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
CACNB1-206ENST00000539338 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.86
CACNB1-206ENST00000539338 PRO0628Q9UI54 55 aa9.65□□□□□ -0.86
CACNB1-206ENST00000539338 USP24Q9UPU5 2620 aa9.65□□□□□ -0.87
CACNB1-206ENST00000539338 HTTP42858 3142 aa9.64□□□□□ -0.87
CACNB1-206ENST00000539338 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
CACNB1-206ENST00000539338 C7orf65Q6ZTY9 151 aa9.63□□□□□ -0.87
CACNB1-206ENST00000539338 K7EQZ3 153 aa9.63□□□□□ -0.87
CACNB1-206ENST00000539338 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms