RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 TRAV13-2A0A0B4J235 113 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 OXTP01178 125 aa6.06□□□□□ -1.44
DDB1-213ENST00000539332 TMEM258P61165 79 aa6.05□□□□□ -1.44
DDB1-213ENST00000539332 NPC2P61916 151 aa6.05□□□□□ -1.44
DDB1-213ENST00000539332 LELP1Q5T871 98 aa6.05□□□□□ -1.44
DDB1-213ENST00000539332 SMCR5Q8TEV8 140 aa6.05□□□□□ -1.44
DDB1-213ENST00000539332 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 DNAL4O96015 105 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 RPL28P46779 137 aaKnown RBP6.04□□□□□ -1.44
DDB1-213ENST00000539332 COX6A2Q02221 97 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 Q6JHZ5 121 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 CDKN2A-AS1Q9UH64 79 aa6.04□□□□□ -1.44
DDB1-213ENST00000539332 H0YGX0 51 aa6.03□□□□□ -1.44
DDB1-213ENST00000539332 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
DDB1-213ENST00000539332 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
DDB1-213ENST00000539332 TRAV13-1A0A0B4J241 112 aa6.03□□□□□ -1.44
DDB1-213ENST00000539332 CRPP02741 224 aa6.03□□□□□ -1.44
DDB1-213ENST00000539332 LYPD5Q6UWN5 251 aa6.03□□□□□ -1.44
DDB1-213ENST00000539332 FAM19A1Q7Z5A9 133 aa6.03□□□□□ -1.44
DDB1-213ENST00000539332 SMIM1B2RUZ4 78 aa6.02□□□□□ -1.45
DDB1-213ENST00000539332 S100A7L2Q5SY68 101 aa6.02□□□□□ -1.45
DDB1-213ENST00000539332 ZNF625Q96I27 306 aaPredicted RBP6.02□□□□□ -1.45
DDB1-213ENST00000539332 C2orf48Q96LS8 159 aa6.02□□□□□ -1.45
DDB1-213ENST00000539332 IGHV3OR16-9A0A0B4J2B5 98 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 LINC00959A0A1B0GUT2 108 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 LINC01561Q8N1V8 128 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
DDB1-213ENST00000539332 FAM19A5Q7Z5A7 132 aaPredicted RBP6□□□□□ -1.45
DDB1-213ENST00000539332 A0A087WZ39 114 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 NUPR2A6NF83 97 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 NDUFC2-KCTD14E9PQ53 114 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 Q8N3U1 123 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 PLA2G2DQ9UNK4 145 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
DDB1-213ENST00000539332 DYNC2H1Q8NCM8 4307 aaKnown RBP5.99□□□□□ -1.45
DDB1-213ENST00000539332 ESRGQ1W209 222 aa5.98□□□□□ -1.45
DDB1-213ENST00000539332 SS18Q15532 418 aa5.98□□□□□ -1.45
DDB1-213ENST00000539332 KLK5Q9Y337 293 aaPredicted RBP5.98□□□□□ -1.45
DDB1-213ENST00000539332 ANGP03950 147 aaKnown RBP5.97□□□□□ -1.45
DDB1-213ENST00000539332 REG3AQ06141 175 aa5.97□□□□□ -1.45
DDB1-213ENST00000539332 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
DDB1-213ENST00000539332 FAM218AQ96MZ4 157 aa5.97□□□□□ -1.45
DDB1-213ENST00000539332 LYSTQ99698 3801 aa5.96□□□□□ -1.45
DDB1-213ENST00000539332 IGKV3OR2-268A0A0C4DH90 116 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 hADV29S1A0JD25 119 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 NDUFC2O95298 119 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 C4orf26Q17RF5 130 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 WFDC10BQ8IUB3 73 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 WWC2-AS2Q96NR7 200 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 APLNQ9ULZ1 77 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.46
DDB1-213ENST00000539332 LOC107984640A0A0U1RRK4 108 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 BCE1O60756 84 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 CLPSL2Q6UWE3 100 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 MUC7Q8TAX7 377 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 DPH3Q96FX2 82 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 UPK3BQ9BT76 320 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 CCL18P55774 89 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 ENHOQ6UWT2 76 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 CHCHD10Q8WYQ3 142 aaPredicted RBP5.95□□□□□ -1.46
DDB1-213ENST00000539332 LINC00588Q9Y4M8 146 aa5.95□□□□□ -1.46
DDB1-213ENST00000539332 IBA57-AS1B1ANH7 110 aa5.94□□□□□ -1.46
DDB1-213ENST00000539332 XCL1P47992 114 aa5.94□□□□□ -1.46
DDB1-213ENST00000539332 COX7B2Q8TF08 81 aa5.94□□□□□ -1.46
DDB1-213ENST00000539332 Q9HAA7 133 aa5.94□□□□□ -1.46
DDB1-213ENST00000539332 DNAH10OSP0CZ25 163 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 CD164Q04900 197 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 Q8IZM0 81 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 ORMDL1Q9P0S3 153 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 KLK12Q9UKR0 248 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 CCKP06307 115 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 KRTAP26-1Q6PEX3 210 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 LINC00337Q8N6G1 96 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 SMIM11BQ8TCY0 68 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 LINC00846Q9NV44 126 aa5.93□□□□□ -1.46
DDB1-213ENST00000539332 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
DDB1-213ENST00000539332 A0A087WYN8 130 aa5.92□□□□□ -1.46
DDB1-213ENST00000539332 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
DDB1-213ENST00000539332 KIAA0087Q14695 138 aa5.92□□□□□ -1.46
DDB1-213ENST00000539332 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
DDB1-213ENST00000539332 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
DDB1-213ENST00000539332 LINC00167Q96N53 147 aa5.91□□□□□ -1.46
DDB1-213ENST00000539332 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
DDB1-213ENST00000539332 IGLV10-54A0A075B6I4 117 aa5.9□□□□□ -1.46
DDB1-213ENST00000539332 LECT2O14960 151 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms