RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 LINC00614P0C842 121 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 RHEBQ15382 184 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 SFTA2Q6UW10 78 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
VAMP1-206ENST00000538970 CTAG1AP78358 180 aa7.21□□□□□ -1.26
VAMP1-206ENST00000538970 TMEM170BQ5T4T1 132 aa7.21□□□□□ -1.26
VAMP1-206ENST00000538970 COMMD7Q86VX2 200 aa7.21□□□□□ -1.26
VAMP1-206ENST00000538970 RPS10P5Q9NQ39 176 aa7.21□□□□□ -1.26
VAMP1-206ENST00000538970 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
VAMP1-206ENST00000538970 CBLN2Q8IUK8 224 aa7.2□□□□□ -1.26
VAMP1-206ENST00000538970 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
VAMP1-206ENST00000538970 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
VAMP1-206ENST00000538970 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
VAMP1-206ENST00000538970 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
VAMP1-206ENST00000538970 HIGD2AQ9BW72 106 aa7.19□□□□□ -1.26
VAMP1-206ENST00000538970 TRAPPC1Q9Y5R8 145 aa7.19□□□□□ -1.26
VAMP1-206ENST00000538970 LINC00158P58513 81 aa7.17□□□□□ -1.26
VAMP1-206ENST00000538970 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
VAMP1-206ENST00000538970 CHTOPQ9Y3Y2 248 aaKnown RBP7.17□□□□□ -1.26
VAMP1-206ENST00000538970 A0A0U1RRA0 63 aa7.16□□□□□ -1.26
VAMP1-206ENST00000538970 TMEM223A0PJW6 202 aa7.16□□□□□ -1.26
VAMP1-206ENST00000538970 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.26
VAMP1-206ENST00000538970 PPDPFQ9H3Y8 114 aa7.15□□□□□ -1.26
VAMP1-206ENST00000538970 PRYO14603 147 aa7.14□□□□□ -1.27
VAMP1-206ENST00000538970 ZNF706Q9Y5V0 76 aaPredicted RBP7.14□□□□□ -1.27
VAMP1-206ENST00000538970 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
VAMP1-206ENST00000538970 SMIM13P0DJ93 91 aa7.13□□□□□ -1.27
VAMP1-206ENST00000538970 SPRR1AP35321 89 aa7.13□□□□□ -1.27
VAMP1-206ENST00000538970 NCR3O14931 201 aa7.12□□□□□ -1.27
VAMP1-206ENST00000538970 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
VAMP1-206ENST00000538970 BOD1L2Q8IYS8 172 aa7.12□□□□□ -1.27
VAMP1-206ENST00000538970 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
VAMP1-206ENST00000538970 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
VAMP1-206ENST00000538970 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
VAMP1-206ENST00000538970 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
VAMP1-206ENST00000538970 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
VAMP1-206ENST00000538970 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
VAMP1-206ENST00000538970 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
VAMP1-206ENST00000538970 ATP6V1G1O75348 118 aa7.1□□□□□ -1.27
VAMP1-206ENST00000538970 APOC3P02656 99 aa7.1□□□□□ -1.27
VAMP1-206ENST00000538970 HERV-K104P63124 156 aa7.1□□□□□ -1.27
VAMP1-206ENST00000538970 DAND5Q8N907 189 aa7.1□□□□□ -1.27
VAMP1-206ENST00000538970 Q8NBF4 154 aa7.1□□□□□ -1.27
VAMP1-206ENST00000538970 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
VAMP1-206ENST00000538970 SMCR5Q8TEV8 140 aa7.09□□□□□ -1.27
VAMP1-206ENST00000538970 TRBV10-3A0A0K0K1G6 114 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 SNAPINO95295 136 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 SVBPQ8N300 66 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 NDUFA12Q9UI09 145 aa7.08□□□□□ -1.28
VAMP1-206ENST00000538970 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
VAMP1-206ENST00000538970 SPINK1P00995 79 aa7.06□□□□□ -1.28
VAMP1-206ENST00000538970 NDUFA5Q16718 116 aa7.06□□□□□ -1.28
VAMP1-206ENST00000538970 MAP1LC3CQ9BXW4 147 aa7.06□□□□□ -1.28
VAMP1-206ENST00000538970 MYMXA0A1B0GTQ4 84 aa7.05□□□□□ -1.28
VAMP1-206ENST00000538970 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
VAMP1-206ENST00000538970 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
VAMP1-206ENST00000538970 B5MCH6 92 aa7.04□□□□□ -1.28
VAMP1-206ENST00000538970 HSBP1O75506 76 aa7.04□□□□□ -1.28
VAMP1-206ENST00000538970 S100A12P80511 92 aa7.04□□□□□ -1.28
VAMP1-206ENST00000538970 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
VAMP1-206ENST00000538970 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
VAMP1-206ENST00000538970 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
VAMP1-206ENST00000538970 H0Y8G0 127 aa7.03□□□□□ -1.28
VAMP1-206ENST00000538970 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
VAMP1-206ENST00000538970 MOBPQ13875 183 aa7.03□□□□□ -1.28
VAMP1-206ENST00000538970 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
VAMP1-206ENST00000538970 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
VAMP1-206ENST00000538970 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.29
VAMP1-206ENST00000538970 LEPROTO15243 131 aa7.02□□□□□ -1.29
VAMP1-206ENST00000538970 DDTP30046 118 aa7.02□□□□□ -1.29
VAMP1-206ENST00000538970 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
VAMP1-206ENST00000538970 Q9BRP9 147 aa7.02□□□□□ -1.29
VAMP1-206ENST00000538970 Q6ZRX8 168 aa7.01□□□□□ -1.29
VAMP1-206ENST00000538970 PLNP26678 52 aa7□□□□□ -1.29
VAMP1-206ENST00000538970 LINC00310P59036 64 aa7□□□□□ -1.29
VAMP1-206ENST00000538970 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
VAMP1-206ENST00000538970 Q8N377 158 aa7□□□□□ -1.29
VAMP1-206ENST00000538970 SPANXB1Q9NS25 103 aaPredicted RBP7□□□□□ -1.29
VAMP1-206ENST00000538970 J3QQQ9 107 aa6.99□□□□□ -1.29
VAMP1-206ENST00000538970 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
VAMP1-206ENST00000538970 IGLV6-57P01721 117 aa6.99□□□□□ -1.29
VAMP1-206ENST00000538970 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
VAMP1-206ENST00000538970 SERF1AO75920 110 aa6.98□□□□□ -1.29
VAMP1-206ENST00000538970 NDUFC2O95298 119 aa6.98□□□□□ -1.29
VAMP1-206ENST00000538970 NMUP48645 174 aa6.98□□□□□ -1.29
VAMP1-206ENST00000538970 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
VAMP1-206ENST00000538970 MIEN1Q9BRT3 115 aa6.98□□□□□ -1.29
VAMP1-206ENST00000538970 SLC25A20O43772 301 aa6.97□□□□□ -1.29
VAMP1-206ENST00000538970 TRGC2P03986 189 aa6.97□□□□□ -1.29
VAMP1-206ENST00000538970 TRAV23DV6A0A075B6W5 121 aa6.96□□□□□ -1.3
VAMP1-206ENST00000538970 DPM2O94777 84 aa6.96□□□□□ -1.3
VAMP1-206ENST00000538970 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
VAMP1-206ENST00000538970 HERVK_113P61574 105 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms