RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 A8MTW9 85 aa6.09□□□□□ -1.44
GGA3-202ENST00000538886 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
GGA3-202ENST00000538886 LEPROTO15243 131 aa6.08□□□□□ -1.44
GGA3-202ENST00000538886 SS18Q15532 418 aa6.08□□□□□ -1.44
GGA3-202ENST00000538886 CXCL5P42830 114 aa6.08□□□□□ -1.44
GGA3-202ENST00000538886 C1orf134Q5TEV5 83 aa6.08□□□□□ -1.44
GGA3-202ENST00000538886 LELP1Q5T871 98 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 SNURFQ9Y675 71 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 TIMM17BO60830 172 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 ZNF561-AS1K7EIQ3 104 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
GGA3-202ENST00000538886 HIGD2BQ4VC39 106 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
GGA3-202ENST00000538886 RMI2Q96E14 147 aa6.06□□□□□ -1.44
GGA3-202ENST00000538886 REG3AQ06141 175 aa6.06□□□□□ -1.44
GGA3-202ENST00000538886 COPS9Q8WXC6 57 aa6.06□□□□□ -1.44
GGA3-202ENST00000538886 IGLV4-69A0A075B6H9 119 aa6.06□□□□□ -1.44
GGA3-202ENST00000538886 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
GGA3-202ENST00000538886 LINC01546A6NGU7 62 aa6.05□□□□□ -1.44
GGA3-202ENST00000538886 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
GGA3-202ENST00000538886 EIF4EBP3O60516 100 aaPredicted RBP6.05□□□□□ -1.44
GGA3-202ENST00000538886 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
GGA3-202ENST00000538886 C6orf226Q5I0X4 101 aa6.04□□□□□ -1.44
GGA3-202ENST00000538886 APLNQ9ULZ1 77 aa6.04□□□□□ -1.44
GGA3-202ENST00000538886 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
GGA3-202ENST00000538886 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
GGA3-202ENST00000538886 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 COL7A1Q02388 2944 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 IGLV4-60A0A075B6I1 120 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 LINC00315P59091 139 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 CNFNQ9BYD5 112 aa6.03□□□□□ -1.44
GGA3-202ENST00000538886 NBDYA0A0U1RRE5 68 aa6.02□□□□□ -1.45
GGA3-202ENST00000538886 COX7A2LO14548 114 aa6.02□□□□□ -1.45
GGA3-202ENST00000538886 ENHOQ6UWT2 76 aa6.02□□□□□ -1.45
GGA3-202ENST00000538886 LINC00474Q9P2X8 69 aa6.02□□□□□ -1.45
GGA3-202ENST00000538886 MIAQ16674 131 aa6.02□□□□□ -1.45
GGA3-202ENST00000538886 HAMPP81172 84 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 F8WEM9 126 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 KIF25-AS1Q9Y6Z4 181 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 TSHBP01222 138 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 ZNF575Q86XF7 245 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 C20orf203Q8NBC4 194 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 CHCHD10Q8WYQ3 142 aaPredicted RBP6.01□□□□□ -1.45
GGA3-202ENST00000538886 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
GGA3-202ENST00000538886 PMAIP1Q13794 54 aa6□□□□□ -1.45
GGA3-202ENST00000538886 NTM-AS1Q6ZSK4 140 aa6□□□□□ -1.45
GGA3-202ENST00000538886 TIMM17AQ99595 171 aa6□□□□□ -1.45
GGA3-202ENST00000538886 NCR3O14931 201 aa6□□□□□ -1.45
GGA3-202ENST00000538886 PIK3CD-AS1Q5SR53 167 aa6□□□□□ -1.45
GGA3-202ENST00000538886 C6orf223Q8N319 242 aa6□□□□□ -1.45
GGA3-202ENST00000538886 MRPL55Q7Z7F7 128 aaKnown RBP6□□□□□ -1.45
GGA3-202ENST00000538886 FAM19A1Q7Z5A9 133 aa5.99□□□□□ -1.45
GGA3-202ENST00000538886 IGIPA6NJ69 53 aa5.99□□□□□ -1.45
GGA3-202ENST00000538886 DNAH10OSP0CZ25 163 aa5.98□□□□□ -1.45
GGA3-202ENST00000538886 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
GGA3-202ENST00000538886 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
GGA3-202ENST00000538886 POLR2KP53803 58 aaKnown RBP5.98□□□□□ -1.45
GGA3-202ENST00000538886 Q6JHZ5 121 aa5.98□□□□□ -1.45
GGA3-202ENST00000538886 TRBV27A0A0K0K1C4 114 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 SLPIP03973 132 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 UPK3BQ9BT76 320 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 TRBV7-6A0A0J9YX20 115 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 AMELXQ99217 191 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 LRCOL1A6NCL2 159 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
GGA3-202ENST00000538886 IGHV1-58A0A0C4DH39 117 aa5.96□□□□□ -1.46
GGA3-202ENST00000538886 H3BNG1 76 aa5.96□□□□□ -1.46
GGA3-202ENST00000538886 RPL28P46779 137 aaKnown RBP5.95□□□□□ -1.46
GGA3-202ENST00000538886 LINC00158P58513 81 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 SPAG11BQ08648 103 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 TRBV6-5A0A0K0K1A5 114 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 LCE6AA0A183 80 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
GGA3-202ENST00000538886 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
GGA3-202ENST00000538886 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
GGA3-202ENST00000538886 A0A087WZ39 114 aa5.94□□□□□ -1.46
GGA3-202ENST00000538886 CHCHD7Q9BUK0 85 aa5.94□□□□□ -1.46
GGA3-202ENST00000538886 LINC00959A0A1B0GUT2 108 aa5.94□□□□□ -1.46
GGA3-202ENST00000538886 CCKP06307 115 aa5.93□□□□□ -1.46
GGA3-202ENST00000538886 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
GGA3-202ENST00000538886 IGLV4-3A0A075B6K6 122 aa5.93□□□□□ -1.46
GGA3-202ENST00000538886 CDC42SE2Q9NRR3 84 aa5.93□□□□□ -1.46
GGA3-202ENST00000538886 FAM218AQ96MZ4 157 aa5.93□□□□□ -1.46
GGA3-202ENST00000538886 TNP2Q05952 138 aa5.92□□□□□ -1.46
GGA3-202ENST00000538886 CDKN2A-AS1Q9UH64 79 aa5.92□□□□□ -1.46
GGA3-202ENST00000538886 ANK2Q01484 3957 aa5.92□□□□□ -1.46
GGA3-202ENST00000538886 FP248Q71RG6 208 aaPredicted RBP5.92□□□□□ -1.46
GGA3-202ENST00000538886 SCXQ7RTU7 201 aa5.91□□□□□ -1.46
GGA3-202ENST00000538886 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
GGA3-202ENST00000538886 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
GGA3-202ENST00000538886 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
GGA3-202ENST00000538886 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.46
GGA3-202ENST00000538886 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
GGA3-202ENST00000538886 H7BZZ5 65 aa5.9□□□□□ -1.46
GGA3-202ENST00000538886 MIR7-3HGQ8N6C7 128 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms