RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 APOC3P02656 99 aa11.94□□□□□ -0.5
MSRB3-208ENST00000538725 VPREB1P12018 145 aa11.93□□□□□ -0.5
MSRB3-208ENST00000538725 RPL24P83731 157 aaKnown RBP11.93□□□□□ -0.5
MSRB3-208ENST00000538725 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
MSRB3-208ENST00000538725 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
MSRB3-208ENST00000538725 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
MSRB3-208ENST00000538725 SNAPINO95295 136 aa11.92□□□□□ -0.5
MSRB3-208ENST00000538725 ANAPC11Q9NYG5 84 aa11.92□□□□□ -0.5
MSRB3-208ENST00000538725 SVBPQ8N300 66 aa11.91□□□□□ -0.5
MSRB3-208ENST00000538725 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
MSRB3-208ENST00000538725 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
MSRB3-208ENST00000538725 FAM229BQ4G0N7 80 aa11.88□□□□□ -0.51
MSRB3-208ENST00000538725 KRTAP13-2Q52LG2 175 aa11.88□□□□□ -0.51
MSRB3-208ENST00000538725 TMEM126AQ9H061 195 aa11.88□□□□□ -0.51
MSRB3-208ENST00000538725 TMEM238C9JI98 176 aa11.87□□□□□ -0.51
MSRB3-208ENST00000538725 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
MSRB3-208ENST00000538725 PRLHP81277 87 aa11.86□□□□□ -0.51
MSRB3-208ENST00000538725 Q8NDZ9 215 aa11.86□□□□□ -0.51
MSRB3-208ENST00000538725 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
MSRB3-208ENST00000538725 TRAV12-1A0A0B4J245 112 aa11.85□□□□□ -0.51
MSRB3-208ENST00000538725 LINC00158P58513 81 aa11.85□□□□□ -0.51
MSRB3-208ENST00000538725 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
MSRB3-208ENST00000538725 M0R378 163 aa11.84□□□□□ -0.51
MSRB3-208ENST00000538725 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
MSRB3-208ENST00000538725 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
MSRB3-208ENST00000538725 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
MSRB3-208ENST00000538725 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
MSRB3-208ENST00000538725 A0A0U1RRA0 63 aa11.8□□□□□ -0.52
MSRB3-208ENST00000538725 CBLN2Q8IUK8 224 aa11.8□□□□□ -0.52
MSRB3-208ENST00000538725 LINC00304Q8N9R0 145 aa11.8□□□□□ -0.52
MSRB3-208ENST00000538725 ATP6V1G1O75348 118 aa11.78□□□□□ -0.52
MSRB3-208ENST00000538725 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
MSRB3-208ENST00000538725 MUC2Q02817 5179 aa11.76□□□□□ -0.53
MSRB3-208ENST00000538725 CTAG1AP78358 180 aa11.76□□□□□ -0.53
MSRB3-208ENST00000538725 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
MSRB3-208ENST00000538725 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
MSRB3-208ENST00000538725 HSBP1O75506 76 aa11.75□□□□□ -0.53
MSRB3-208ENST00000538725 HERV-K104P63124 156 aa11.75□□□□□ -0.53
MSRB3-208ENST00000538725 LINC00587B1AMM8 73 aa11.74□□□□□ -0.53
MSRB3-208ENST00000538725 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
MSRB3-208ENST00000538725 BOD1L2Q8IYS8 172 aa11.74□□□□□ -0.53
MSRB3-208ENST00000538725 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
MSRB3-208ENST00000538725 RETNLBQ9BQ08 111 aa11.73□□□□□ -0.53
MSRB3-208ENST00000538725 NDUFA12Q9UI09 145 aa11.72□□□□□ -0.53
MSRB3-208ENST00000538725 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.53
MSRB3-208ENST00000538725 MYMXA0A1B0GTQ4 84 aa11.7□□□□□ -0.54
MSRB3-208ENST00000538725 PRYO14603 147 aa11.7□□□□□ -0.54
MSRB3-208ENST00000538725 SPRR4Q96PI1 79 aa11.7□□□□□ -0.54
MSRB3-208ENST00000538725 H0Y8G0 127 aa11.69□□□□□ -0.54
MSRB3-208ENST00000538725 TRGC2P03986 189 aa11.69□□□□□ -0.54
MSRB3-208ENST00000538725 MAP1LC3CQ9BXW4 147 aa11.69□□□□□ -0.54
MSRB3-208ENST00000538725 KCNQ1DNQ9H478 68 aa11.69□□□□□ -0.54
MSRB3-208ENST00000538725 NCR3O14931 201 aa11.68□□□□□ -0.54
MSRB3-208ENST00000538725 LEPROTL1O95214 131 aa11.68□□□□□ -0.54
MSRB3-208ENST00000538725 LINC00337Q8N6G1 96 aa11.68□□□□□ -0.54
MSRB3-208ENST00000538725 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
MSRB3-208ENST00000538725 SPRR1AP35321 89 aa11.67□□□□□ -0.54
MSRB3-208ENST00000538725 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
MSRB3-208ENST00000538725 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
MSRB3-208ENST00000538725 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
MSRB3-208ENST00000538725 LEPROTO15243 131 aa11.65□□□□□ -0.54
MSRB3-208ENST00000538725 TRBV10-3A0A0K0K1G6 114 aa11.64□□□□□ -0.55
MSRB3-208ENST00000538725 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
MSRB3-208ENST00000538725 SERF1AO75920 110 aa11.64□□□□□ -0.55
MSRB3-208ENST00000538725 TPRXLQ17RH7 258 aa11.64□□□□□ -0.55
MSRB3-208ENST00000538725 SMCR5Q8TEV8 140 aa11.64□□□□□ -0.55
MSRB3-208ENST00000538725 LOC107984156A0A0G2JMH3 177 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 PLNP26678 52 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 LINC00310P59036 64 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 TSPEAR-AS2P59090 65 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 ARL17AQ8IVW1 177 aa11.63□□□□□ -0.55
MSRB3-208ENST00000538725 S100A12P80511 92 aa11.62□□□□□ -0.55
MSRB3-208ENST00000538725 CDIP1Q9H305 208 aa11.62□□□□□ -0.55
MSRB3-208ENST00000538725 HSPB8Q9UJY1 196 aa11.62□□□□□ -0.55
MSRB3-208ENST00000538725 J3QQQ9 107 aa11.6□□□□□ -0.55
MSRB3-208ENST00000538725 DAND5Q8N907 189 aa11.6□□□□□ -0.55
MSRB3-208ENST00000538725 DPM2O94777 84 aa11.59□□□□□ -0.55
MSRB3-208ENST00000538725 FABP4P15090 132 aa11.59□□□□□ -0.55
MSRB3-208ENST00000538725 TRBV10-2A0A0K0K1G8 114 aa11.58□□□□□ -0.56
MSRB3-208ENST00000538725 HERVK_113P61574 105 aa11.58□□□□□ -0.56
MSRB3-208ENST00000538725 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
MSRB3-208ENST00000538725 B5MCH6 92 aa11.57□□□□□ -0.56
MSRB3-208ENST00000538725 DDTP30046 118 aa11.57□□□□□ -0.56
MSRB3-208ENST00000538725 NMUP48645 174 aa11.57□□□□□ -0.56
MSRB3-208ENST00000538725 Q8NBF4 154 aa11.57□□□□□ -0.56
MSRB3-208ENST00000538725 PMCHL2Q9BQD1 86 aa11.57□□□□□ -0.56
MSRB3-208ENST00000538725 IGKCP01834 107 aa11.56□□□□□ -0.56
MSRB3-208ENST00000538725 LINC00483Q53H64 154 aa11.56□□□□□ -0.56
MSRB3-208ENST00000538725 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
MSRB3-208ENST00000538725 MIEN1Q9BRT3 115 aa11.55□□□□□ -0.56
MSRB3-208ENST00000538725 COLCA2A8K830 154 aa11.54□□□□□ -0.56
MSRB3-208ENST00000538725 NDUFC2O95298 119 aa11.53□□□□□ -0.56
MSRB3-208ENST00000538725 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
MSRB3-208ENST00000538725 FP248Q71RG6 208 aaPredicted RBP11.53□□□□□ -0.56
MSRB3-208ENST00000538725 SLC7A5P1Q8MH63 180 aa11.53□□□□□ -0.56
MSRB3-208ENST00000538725 SPANXB1Q9NS25 103 aaPredicted RBP11.53□□□□□ -0.56
MSRB3-208ENST00000538725 ERC2-IT1O76042 136 aa11.52□□□□□ -0.57
MSRB3-208ENST00000538725 SPINK1P00995 79 aa11.52□□□□□ -0.57
MSRB3-208ENST00000538725 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms