RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 C1orf195Q5TG92 126 aa11.61□□□□□ -0.55
SCARB1-205ENST00000538291 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
SCARB1-205ENST00000538291 LINC00315P59091 139 aa11.61□□□□□ -0.55
SCARB1-205ENST00000538291 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
SCARB1-205ENST00000538291 PMAIP1Q13794 54 aa11.6□□□□□ -0.55
SCARB1-205ENST00000538291 NBDYA0A0U1RRE5 68 aa11.58□□□□□ -0.55
SCARB1-205ENST00000538291 RTL8CO15255 209 aa11.58□□□□□ -0.56
SCARB1-205ENST00000538291 CRYGAP11844 174 aa11.57□□□□□ -0.56
SCARB1-205ENST00000538291 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
SCARB1-205ENST00000538291 SPATA3Q8NHX4 192 aa11.57□□□□□ -0.56
SCARB1-205ENST00000538291 PSPHP1O15172 72 aa11.56□□□□□ -0.56
SCARB1-205ENST00000538291 TP53AIP1Q9HCN2 124 aa11.56□□□□□ -0.56
SCARB1-205ENST00000538291 FASNP49327 2511 aaKnown RBP11.56□□□□□ -0.56
SCARB1-205ENST00000538291 LINC01546A6NGU7 62 aa11.55□□□□□ -0.56
SCARB1-205ENST00000538291 C16orf90A8MZG2 172 aa11.55□□□□□ -0.56
SCARB1-205ENST00000538291 Q6ZRP5 223 aa11.55□□□□□ -0.56
SCARB1-205ENST00000538291 MTORP42345 2549 aa11.54□□□□□ -0.56
SCARB1-205ENST00000538291 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
SCARB1-205ENST00000538291 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
SCARB1-205ENST00000538291 IGLV5-45A0A087WSX0 123 aa11.52□□□□□ -0.56
SCARB1-205ENST00000538291 WDR87Q6ZQQ6 2873 aa11.52□□□□□ -0.56
SCARB1-205ENST00000538291 SPTBN4Q9H254 2564 aa11.52□□□□□ -0.57
SCARB1-205ENST00000538291 Q8NBF4 154 aa11.52□□□□□ -0.57
SCARB1-205ENST00000538291 A0A1B0GW54 56 aa11.51□□□□□ -0.57
SCARB1-205ENST00000538291 TYMSOSQ8TAI1 123 aa11.51□□□□□ -0.57
SCARB1-205ENST00000538291 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
SCARB1-205ENST00000538291 ELOF1P60002 83 aaKnown RBP11.51□□□□□ -0.57
SCARB1-205ENST00000538291 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
SCARB1-205ENST00000538291 Q8NAQ8 132 aa11.5□□□□□ -0.57
SCARB1-205ENST00000538291 Q6ZRX8 168 aa11.49□□□□□ -0.57
SCARB1-205ENST00000538291 F8P00451 2351 aa11.48□□□□□ -0.57
SCARB1-205ENST00000538291 EPM2AB3EWF7 344 aa11.48□□□□□ -0.57
SCARB1-205ENST00000538291 ACYP2P14621 99 aa11.46□□□□□ -0.57
SCARB1-205ENST00000538291 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.57
SCARB1-205ENST00000538291 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
SCARB1-205ENST00000538291 A0A1B0GU69 56 aa11.45□□□□□ -0.58
SCARB1-205ENST00000538291 LINC00313P59037 77 aa11.45□□□□□ -0.58
SCARB1-205ENST00000538291 Q9UF83 564 aa11.45□□□□□ -0.58
SCARB1-205ENST00000538291 GVQW2A0A096LPI5 108 aaPredicted RBP11.44□□□□□ -0.58
SCARB1-205ENST00000538291 PLA2G1BP04054 148 aaKnown RBP11.43□□□□□ -0.58
SCARB1-205ENST00000538291 BCE1O60756 84 aa11.41□□□□□ -0.58
SCARB1-205ENST00000538291 POLQO75417 2590 aa11.41□□□□□ -0.58
SCARB1-205ENST00000538291 J3QL48 77 aa11.4□□□□□ -0.58
SCARB1-205ENST00000538291 COL4A2P08572 1712 aa11.4□□□□□ -0.59
SCARB1-205ENST00000538291 FAM218AQ96MZ4 157 aa11.39□□□□□ -0.59
SCARB1-205ENST00000538291 DNAH10OSP0CZ25 163 aa11.39□□□□□ -0.59
SCARB1-205ENST00000538291 ST20-AS1Q8NBB2 130 aa11.38□□□□□ -0.59
SCARB1-205ENST00000538291 H3BPC8 53 aa11.37□□□□□ -0.59
SCARB1-205ENST00000538291 ATP11AUNQ6ZP68 121 aa11.37□□□□□ -0.59
SCARB1-205ENST00000538291 Q6ZQT0 140 aa11.37□□□□□ -0.59
SCARB1-205ENST00000538291 CDIP1Q9H305 208 aa11.36□□□□□ -0.59
SCARB1-205ENST00000538291 LOC110117498A0A087WWA1 95 aa11.36□□□□□ -0.59
SCARB1-205ENST00000538291 RPL37AP61513 92 aaKnown RBP11.35□□□□□ -0.59
SCARB1-205ENST00000538291 PTPRBP23467 1997 aa11.35□□□□□ -0.59
SCARB1-205ENST00000538291 ACANP16112 2415 aa11.34□□□□□ -0.59
SCARB1-205ENST00000538291 Q96NJ1 140 aa11.34□□□□□ -0.59
SCARB1-205ENST00000538291 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
SCARB1-205ENST00000538291 KLK9Q2XQG4 91 aa11.31□□□□□ -0.6
SCARB1-205ENST00000538291 ANKRD17O75179 2603 aaKnown RBP11.31□□□□□ -0.6
SCARB1-205ENST00000538291 C8orf87E5RJ46 101 aa11.29□□□□□ -0.6
SCARB1-205ENST00000538291 VPREB1P12018 145 aa11.29□□□□□ -0.6
SCARB1-205ENST00000538291 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-205ENST00000538291 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
SCARB1-205ENST00000538291 SPAG11AQ6PDA7 123 aa11.28□□□□□ -0.6
SCARB1-205ENST00000538291 K7EIL1 84 aa11.26□□□□□ -0.61
SCARB1-205ENST00000538291 COL27A1Q8IZC6 1860 aaPredicted RBP11.26□□□□□ -0.61
SCARB1-205ENST00000538291 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
SCARB1-205ENST00000538291 LOC101927531A0A1B0GV80 90 aa11.25□□□□□ -0.61
SCARB1-205ENST00000538291 IGLV6-57P01721 117 aa11.25□□□□□ -0.61
SCARB1-205ENST00000538291 A8MWP4 228 aa11.23□□□□□ -0.61
SCARB1-205ENST00000538291 COX6B2Q6YFQ2 88 aa11.23□□□□□ -0.61
SCARB1-205ENST00000538291 IGLV1-50A0A075B6I6 118 aa11.22□□□□□ -0.61
SCARB1-205ENST00000538291 CSNK1G2-AS1Q8NCQ2 148 aa11.22□□□□□ -0.61
SCARB1-205ENST00000538291 SERTAD4-AS1Q5TG53 156 aa11.21□□□□□ -0.61
SCARB1-205ENST00000538291 KRTAP10-11P60412 298 aa11.21□□□□□ -0.62
SCARB1-205ENST00000538291 PRO0461Q9UI25 63 aa11.21□□□□□ -0.62
SCARB1-205ENST00000538291 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
SCARB1-205ENST00000538291 KCNQ1DNQ9H478 68 aa11.19□□□□□ -0.62
SCARB1-205ENST00000538291 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
SCARB1-205ENST00000538291 EPG5Q9HCE0 2579 aa11.18□□□□□ -0.62
SCARB1-205ENST00000538291 TM2D3Q9BRN9 247 aa11.18□□□□□ -0.62
SCARB1-205ENST00000538291 IGLV8-61A0A075B6I0 122 aa11.17□□□□□ -0.62
SCARB1-205ENST00000538291 LITAFQ99732 161 aa11.17□□□□□ -0.62
SCARB1-205ENST00000538291 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
SCARB1-205ENST00000538291 SSBP3-AS1Q7Z2R9 100 aa11.15□□□□□ -0.63
SCARB1-205ENST00000538291 ZNF861PO60384 105 aa11.13□□□□□ -0.63
SCARB1-205ENST00000538291 K7EQZ3 153 aa11.13□□□□□ -0.63
SCARB1-205ENST00000538291 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
SCARB1-205ENST00000538291 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
SCARB1-205ENST00000538291 A0A087WTM6 91 aa11.12□□□□□ -0.63
SCARB1-205ENST00000538291 PRO0628Q9UI54 55 aa11.12□□□□□ -0.63
SCARB1-205ENST00000538291 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
SCARB1-205ENST00000538291 FLNBO75369 2602 aaKnown RBP11.1□□□□□ -0.63
SCARB1-205ENST00000538291 IGFL1Q6UW32 110 aa11.09□□□□□ -0.63
SCARB1-205ENST00000538291 DSCR10P59022 87 aa11.09□□□□□ -0.63
SCARB1-205ENST00000538291 A0A096LNT2 108 aa11.08□□□□□ -0.64
SCARB1-205ENST00000538291 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
SCARB1-205ENST00000538291 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
SCARB1-205ENST00000538291 RPS28P62857 69 aaKnown RBP11.06□□□□□ -0.64
SCARB1-205ENST00000538291 C8orf17Q9NRJ1 99 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms