RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ITPR2Q14571 2701 aa7.35□□□□□ -1.23
RTN3-208ENST00000537981 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
RTN3-208ENST00000537981 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
RTN3-208ENST00000537981 BPY2O14599 106 aa7.35□□□□□ -1.23
RTN3-208ENST00000537981 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
RTN3-208ENST00000537981 BCE1O60756 84 aa7.34□□□□□ -1.23
RTN3-208ENST00000537981 NDUFC1O43677 76 aa7.34□□□□□ -1.23
RTN3-208ENST00000537981 FUSP35637 526 aaKnown RBP eCLIP7.34□□□□□ -1.23
RTN3-208ENST00000537981 DEFB131AP59861 70 aa7.34□□□□□ -1.23
RTN3-208ENST00000537981 LINC01006Q8NI28 216 aa7.34□□□□□ -1.23
RTN3-208ENST00000537981 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.24
RTN3-208ENST00000537981 UNC79Q9P2D8 2635 aa7.33□□□□□ -1.24
RTN3-208ENST00000537981 MYO9AB2RTY4 2548 aa7.33□□□□□ -1.24
RTN3-208ENST00000537981 USMG5Q96IX5 58 aa7.33□□□□□ -1.24
RTN3-208ENST00000537981 SONP18583 2426 aaKnown RBP7.32□□□□□ -1.24
RTN3-208ENST00000537981 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
RTN3-208ENST00000537981 A0A1W2PPR1 153 aa7.32□□□□□ -1.24
RTN3-208ENST00000537981 C9orf116Q5BN46 136 aaPredicted RBP7.32□□□□□ -1.24
RTN3-208ENST00000537981 NAV2Q8IVL1 2488 aa7.32□□□□□ -1.24
RTN3-208ENST00000537981 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
RTN3-208ENST00000537981 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
RTN3-208ENST00000537981 RBM12B-AS1Q9P1G2 102 aa7.31□□□□□ -1.24
RTN3-208ENST00000537981 ANKRD17O75179 2603 aaKnown RBP7.31□□□□□ -1.24
RTN3-208ENST00000537981 TRGV1A0A0A0MS02 117 aa7.31□□□□□ -1.24
RTN3-208ENST00000537981 IGLV1-40P01703 118 aa7.31□□□□□ -1.24
RTN3-208ENST00000537981 SETD2Q9BYW2 2564 aaPredicted RBP7.31□□□□□ -1.24
RTN3-208ENST00000537981 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
RTN3-208ENST00000537981 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 H3BUX3 64 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 CXCL6P80162 114 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 CCDC168Q8NDH2 2452 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 UBE2L6O14933 153 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 IGHV4-38-2P0DP08 117 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 PRR4Q16378 134 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 C11orf71Q6IPW1 123 aa7.3□□□□□ -1.24
RTN3-208ENST00000537981 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 LINC00612Q8N6U2 182 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
RTN3-208ENST00000537981 LYRM9A8MSI8 78 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 Q6ZQY7 126 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 ESM1Q9NQ30 184 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 CELA1Q9UNI1 258 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 MUC7Q8TAX7 377 aa7.28□□□□□ -1.24
RTN3-208ENST00000537981 MAST4O15021 2626 aa7.27□□□□□ -1.24
RTN3-208ENST00000537981 LMO4P61968 165 aa7.27□□□□□ -1.25
RTN3-208ENST00000537981 DEFB136Q30KP8 78 aa7.27□□□□□ -1.25
RTN3-208ENST00000537981 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
RTN3-208ENST00000537981 CYSRT1A8MQ03 144 aa7.26□□□□□ -1.25
RTN3-208ENST00000537981 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
RTN3-208ENST00000537981 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
RTN3-208ENST00000537981 C18orf65Q6ZTR6 163 aa7.26□□□□□ -1.25
RTN3-208ENST00000537981 A8MUN3 132 aa7.25□□□□□ -1.25
RTN3-208ENST00000537981 Q1T7F1 81 aa7.24□□□□□ -1.25
RTN3-208ENST00000537981 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
RTN3-208ENST00000537981 H3BUA1 57 aa7.23□□□□□ -1.25
RTN3-208ENST00000537981 SLURP1P55000 103 aa7.22□□□□□ -1.25
RTN3-208ENST00000537981 KRTAP10-9P60411 292 aa7.22□□□□□ -1.25
RTN3-208ENST00000537981 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
RTN3-208ENST00000537981 ZNF469Q96JG9 3925 aaPredicted RBP7.22□□□□□ -1.25
RTN3-208ENST00000537981 A6NDX4 124 aa7.22□□□□□ -1.25
RTN3-208ENST00000537981 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
RTN3-208ENST00000537981 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
RTN3-208ENST00000537981 ERC2-IT1O76042 136 aa7.21□□□□□ -1.26
RTN3-208ENST00000537981 SYCNQ0VAF6 134 aa7.21□□□□□ -1.26
RTN3-208ENST00000537981 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.26
RTN3-208ENST00000537981 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
RTN3-208ENST00000537981 DYNLRB2Q8TF09 96 aa7.2□□□□□ -1.26
RTN3-208ENST00000537981 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
RTN3-208ENST00000537981 C3orf84H3BNL1 204 aa7.19□□□□□ -1.26
RTN3-208ENST00000537981 FBXL19-AS1Q494R0 122 aa7.19□□□□□ -1.26
RTN3-208ENST00000537981 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
RTN3-208ENST00000537981 IGHV4-31P0DP07 118 aa7.19□□□□□ -1.26
RTN3-208ENST00000537981 PDZD2O15018 2839 aa7.18□□□□□ -1.26
RTN3-208ENST00000537981 TRGV4A0A0C4DH28 118 aa7.18□□□□□ -1.26
RTN3-208ENST00000537981 INSP01308 110 aa7.18□□□□□ -1.26
RTN3-208ENST00000537981 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
RTN3-208ENST00000537981 IGLV10-54A0A075B6I4 117 aa7.18□□□□□ -1.26
RTN3-208ENST00000537981 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
RTN3-208ENST00000537981 Q5VV11 94 aa7.17□□□□□ -1.26
RTN3-208ENST00000537981 LINC00588Q9Y4M8 146 aa7.17□□□□□ -1.26
RTN3-208ENST00000537981 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
RTN3-208ENST00000537981 KIAA0087Q14695 138 aa7.16□□□□□ -1.26
RTN3-208ENST00000537981 CSMD3Q7Z407 3707 aa7.16□□□□□ -1.26
RTN3-208ENST00000537981 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
RTN3-208ENST00000537981 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
RTN3-208ENST00000537981 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
RTN3-208ENST00000537981 ACANP16112 2415 aa7.15□□□□□ -1.26
RTN3-208ENST00000537981 PSCAO43653 123 aa7.15□□□□□ -1.26
RTN3-208ENST00000537981 IGHV4-59P01825 116 aa7.15□□□□□ -1.26
RTN3-208ENST00000537981 A0A096LPF7 62 aa7.15□□□□□ -1.27
RTN3-208ENST00000537981 Q8IZM0 81 aa7.15□□□□□ -1.27
RTN3-208ENST00000537981 ITPR3Q14573 2671 aa7.14□□□□□ -1.27
RTN3-208ENST00000537981 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
RTN3-208ENST00000537981 IGHV4-28A0A0C4DH34 117 aa7.13□□□□□ -1.27
RTN3-208ENST00000537981 IGHV4-61A0A0C4DH41 118 aa7.13□□□□□ -1.27
RTN3-208ENST00000537981 MTORP42345 2549 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms