RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CXCL6P80162 114 aa7.9□□□□□ -1.14
SEMA4D-221ENST00000537934 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.15
SEMA4D-221ENST00000537934 A8MTW9 85 aa7.89□□□□□ -1.15
SEMA4D-221ENST00000537934 HAMPP81172 84 aa7.89□□□□□ -1.15
SEMA4D-221ENST00000537934 Q6ZVQ6 151 aa7.89□□□□□ -1.15
SEMA4D-221ENST00000537934 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
SEMA4D-221ENST00000537934 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
SEMA4D-221ENST00000537934 NANOS2P60321 138 aaKnown RBP7.88□□□□□ -1.15
SEMA4D-221ENST00000537934 KRTAP10-3P60369 221 aa7.88□□□□□ -1.15
SEMA4D-221ENST00000537934 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
SEMA4D-221ENST00000537934 TRBV10-1A0A0K0K1A3 114 aa7.87□□□□□ -1.15
SEMA4D-221ENST00000537934 UBE2L6O14933 153 aa7.87□□□□□ -1.15
SEMA4D-221ENST00000537934 Q8N3U1 123 aa7.87□□□□□ -1.15
SEMA4D-221ENST00000537934 CCL24O00175 119 aa7.87□□□□□ -1.15
SEMA4D-221ENST00000537934 ERC2-IT1O76042 136 aa7.86□□□□□ -1.15
SEMA4D-221ENST00000537934 TMEM254Q8TBM7 123 aa7.86□□□□□ -1.15
SEMA4D-221ENST00000537934 IGHV3OR16-9A0A0B4J2B5 98 aa7.85□□□□□ -1.15
SEMA4D-221ENST00000537934 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
SEMA4D-221ENST00000537934 DEFB131AP59861 70 aa7.85□□□□□ -1.15
SEMA4D-221ENST00000537934 C6orf223Q8N319 242 aa7.85□□□□□ -1.15
SEMA4D-221ENST00000537934 A0A087WZ39 114 aa7.84□□□□□ -1.15
SEMA4D-221ENST00000537934 M0R2N4 97 aa7.84□□□□□ -1.15
SEMA4D-221ENST00000537934 NREPQ16612 68 aa7.84□□□□□ -1.15
SEMA4D-221ENST00000537934 ESRGQ1W209 222 aa7.84□□□□□ -1.15
SEMA4D-221ENST00000537934 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
SEMA4D-221ENST00000537934 FBN1P35555 2871 aaKnown RBP7.84□□□□□ -1.16
SEMA4D-221ENST00000537934 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
SEMA4D-221ENST00000537934 PDE6GP18545 87 aa7.83□□□□□ -1.16
SEMA4D-221ENST00000537934 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
SEMA4D-221ENST00000537934 DYNLRB2Q8TF09 96 aa7.82□□□□□ -1.16
SEMA4D-221ENST00000537934 C11orf68Q9H3H3 251 aaKnown RBP7.82□□□□□ -1.16
SEMA4D-221ENST00000537934 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
SEMA4D-221ENST00000537934 TRRAPQ9Y4A5 3859 aa7.82□□□□□ -1.16
SEMA4D-221ENST00000537934 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
SEMA4D-221ENST00000537934 DEFB114Q30KQ6 69 aa7.81□□□□□ -1.16
SEMA4D-221ENST00000537934 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
SEMA4D-221ENST00000537934 IGKV3OR2-268A0A0C4DH90 116 aa7.81□□□□□ -1.16
SEMA4D-221ENST00000537934 INSP01308 110 aa7.81□□□□□ -1.16
SEMA4D-221ENST00000537934 C6orf226Q5I0X4 101 aa7.81□□□□□ -1.16
SEMA4D-221ENST00000537934 TRGV1A0A0A0MS02 117 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 PRR3P79522 188 aaKnown RBP7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 STAB1Q9NY15 2570 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 BPY2O14599 106 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 Q6ZRU5 148 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 PRYO14603 147 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 C6orf99Q4VX62 202 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 Q6ZTC4 211 aa7.8□□□□□ -1.16
SEMA4D-221ENST00000537934 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
SEMA4D-221ENST00000537934 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
SEMA4D-221ENST00000537934 SPATA3Q8NHX4 192 aa7.78□□□□□ -1.16
SEMA4D-221ENST00000537934 H3BQ85 93 aa7.77□□□□□ -1.17
SEMA4D-221ENST00000537934 COL6A5A8TX70 2615 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 MAP6D1Q9H9H5 199 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 SCXQ7RTU7 201 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 Q8IZM0 81 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 RETNQ9HD89 108 aa7.76□□□□□ -1.17
SEMA4D-221ENST00000537934 KRTAP24-1Q3LI83 254 aa7.75□□□□□ -1.17
SEMA4D-221ENST00000537934 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
SEMA4D-221ENST00000537934 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
SEMA4D-221ENST00000537934 LINC00959A0A1B0GUT2 108 aa7.74□□□□□ -1.17
SEMA4D-221ENST00000537934 COX17Q14061 63 aa7.74□□□□□ -1.17
SEMA4D-221ENST00000537934 IGLV1-51P01701 117 aa7.73□□□□□ -1.17
SEMA4D-221ENST00000537934 Q1T7F1 81 aa7.73□□□□□ -1.17
SEMA4D-221ENST00000537934 PKD1L1Q8TDX9 2849 aa7.73□□□□□ -1.17
SEMA4D-221ENST00000537934 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
SEMA4D-221ENST00000537934 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
SEMA4D-221ENST00000537934 TRBV6-8A0A0A6YYG3 113 aa7.72□□□□□ -1.17
SEMA4D-221ENST00000537934 LOC100131303A0A0U1RQF7 123 aa7.72□□□□□ -1.17
SEMA4D-221ENST00000537934 Q6ZQY7 126 aa7.72□□□□□ -1.17
SEMA4D-221ENST00000537934 CD164L2Q6UWJ8 174 aa7.71□□□□□ -1.18
SEMA4D-221ENST00000537934 CD164Q04900 197 aa7.7□□□□□ -1.18
SEMA4D-221ENST00000537934 HIGD2AQ9BW72 106 aa7.7□□□□□ -1.18
SEMA4D-221ENST00000537934 IGKV4-1P06312 121 aa7.69□□□□□ -1.18
SEMA4D-221ENST00000537934 Q6ZRP5 223 aa7.69□□□□□ -1.18
SEMA4D-221ENST00000537934 Q8NDZ9 215 aa7.69□□□□□ -1.18
SEMA4D-221ENST00000537934 DAD1P61803 113 aa7.68□□□□□ -1.18
SEMA4D-221ENST00000537934 STHQ8IWL8 128 aa7.68□□□□□ -1.18
SEMA4D-221ENST00000537934 NOP10Q9NPE3 64 aaKnown RBP7.68□□□□□ -1.18
SEMA4D-221ENST00000537934 C19orf73Q9NVV2 129 aa7.68□□□□□ -1.18
SEMA4D-221ENST00000537934 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
SEMA4D-221ENST00000537934 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
SEMA4D-221ENST00000537934 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
SEMA4D-221ENST00000537934 Q8N9L7 120 aa7.66□□□□□ -1.18
SEMA4D-221ENST00000537934 IGLV6-57P01721 117 aa7.66□□□□□ -1.18
SEMA4D-221ENST00000537934 COX7BP24311 80 aa7.65□□□□□ -1.18
SEMA4D-221ENST00000537934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
SEMA4D-221ENST00000537934 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
SEMA4D-221ENST00000537934 TRGV4A0A0C4DH28 118 aa7.65□□□□□ -1.19
SEMA4D-221ENST00000537934 LRCOL1A6NCL2 159 aa7.64□□□□□ -1.19
SEMA4D-221ENST00000537934 C9orf116Q5BN46 136 aaPredicted RBP7.64□□□□□ -1.19
SEMA4D-221ENST00000537934 LCE6AA0A183 80 aa7.63□□□□□ -1.19
SEMA4D-221ENST00000537934 A0A1B0GUV1 79 aa7.63□□□□□ -1.19
SEMA4D-221ENST00000537934 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
SEMA4D-221ENST00000537934 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
SEMA4D-221ENST00000537934 PSPHP1O15172 72 aa7.62□□□□□ -1.19
SEMA4D-221ENST00000537934 NOTCH1P46531 2555 aa7.62□□□□□ -1.19
SEMA4D-221ENST00000537934 CMC4P56277 68 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms