RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 SPANXA1Q9NS26 97 aa8.26□□□□□ -1.09
LPCAT3-206ENST00000537179 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 K7EN84 100 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 SPINK1P00995 79 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 CKS1BP61024 79 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 FAM19A1Q7Z5A9 133 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
LPCAT3-206ENST00000537179 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
LPCAT3-206ENST00000537179 PRSS2P07478 247 aa8.24□□□□□ -1.09
LPCAT3-206ENST00000537179 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
LPCAT3-206ENST00000537179 FAM19A2Q8N3H0 131 aa8.24□□□□□ -1.09
LPCAT3-206ENST00000537179 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
LPCAT3-206ENST00000537179 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
LPCAT3-206ENST00000537179 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
LPCAT3-206ENST00000537179 Q8N377 158 aa8.23□□□□□ -1.09
LPCAT3-206ENST00000537179 C9JQL5 133 aa8.22□□□□□ -1.09
LPCAT3-206ENST00000537179 TEX43Q6ZNM6 134 aa8.22□□□□□ -1.09
LPCAT3-206ENST00000537179 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
LPCAT3-206ENST00000537179 TRGC2P03986 189 aa8.21□□□□□ -1.1
LPCAT3-206ENST00000537179 Q8IZM0 81 aa8.21□□□□□ -1.1
LPCAT3-206ENST00000537179 NKAPP1Q8N9T2 125 aa8.21□□□□□ -1.1
LPCAT3-206ENST00000537179 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
LPCAT3-206ENST00000537179 PDE6DO43924 150 aa8.2□□□□□ -1.1
LPCAT3-206ENST00000537179 PPP1R17O96001 155 aa8.2□□□□□ -1.1
LPCAT3-206ENST00000537179 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
LPCAT3-206ENST00000537179 BORCS7Q96B45 105 aa8.2□□□□□ -1.1
LPCAT3-206ENST00000537179 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
LPCAT3-206ENST00000537179 F8VRH5 84 aa8.19□□□□□ -1.1
LPCAT3-206ENST00000537179 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
LPCAT3-206ENST00000537179 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
LPCAT3-206ENST00000537179 A8MWL6 223 aa8.18□□□□□ -1.1
LPCAT3-206ENST00000537179 Q6ZN92 141 aa8.18□□□□□ -1.1
LPCAT3-206ENST00000537179 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
LPCAT3-206ENST00000537179 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
LPCAT3-206ENST00000537179 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
LPCAT3-206ENST00000537179 GNB1LQ9BYB4 327 aa8.17□□□□□ -1.1
LPCAT3-206ENST00000537179 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
LPCAT3-206ENST00000537179 CFC1P0CG37 223 aa8.16□□□□□ -1.1
LPCAT3-206ENST00000537179 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
LPCAT3-206ENST00000537179 NAT8Q9UHE5 227 aa8.16□□□□□ -1.1
LPCAT3-206ENST00000537179 M0R378 163 aa8.15□□□□□ -1.1
LPCAT3-206ENST00000537179 SLC25A20O43772 301 aa8.15□□□□□ -1.1
LPCAT3-206ENST00000537179 SCGB1D1O95968 90 aa8.15□□□□□ -1.1
LPCAT3-206ENST00000537179 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.1
LPCAT3-206ENST00000537179 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
LPCAT3-206ENST00000537179 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
LPCAT3-206ENST00000537179 CT83Q5H943 113 aa8.14□□□□□ -1.11
LPCAT3-206ENST00000537179 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
LPCAT3-206ENST00000537179 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
LPCAT3-206ENST00000537179 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
LPCAT3-206ENST00000537179 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
LPCAT3-206ENST00000537179 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
LPCAT3-206ENST00000537179 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
LPCAT3-206ENST00000537179 EIF5A2Q9GZV4 153 aaKnown RBP8.12□□□□□ -1.11
LPCAT3-206ENST00000537179 ZC2HC1BQ5TFG8 222 aa8.11□□□□□ -1.11
LPCAT3-206ENST00000537179 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
LPCAT3-206ENST00000537179 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
LPCAT3-206ENST00000537179 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
LPCAT3-206ENST00000537179 CXCL5P42830 114 aa8.1□□□□□ -1.11
LPCAT3-206ENST00000537179 SIGMAR1Q99720 223 aa8.1□□□□□ -1.11
LPCAT3-206ENST00000537179 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
LPCAT3-206ENST00000537179 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
LPCAT3-206ENST00000537179 VAMP3Q15836 100 aa8.08□□□□□ -1.12
LPCAT3-206ENST00000537179 BATFQ16520 125 aa8.08□□□□□ -1.12
LPCAT3-206ENST00000537179 FAM104BQ5XKR9 115 aa8.08□□□□□ -1.12
LPCAT3-206ENST00000537179 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
LPCAT3-206ENST00000537179 IGLC3P0DOY3 106 aa8.06□□□□□ -1.12
LPCAT3-206ENST00000537179 VPREB1P12018 145 aa8.06□□□□□ -1.12
LPCAT3-206ENST00000537179 RIGQ13278 110 aa8.06□□□□□ -1.12
LPCAT3-206ENST00000537179 MOBPQ13875 183 aa8.06□□□□□ -1.12
LPCAT3-206ENST00000537179 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
LPCAT3-206ENST00000537179 CKS2P33552 79 aa8.05□□□□□ -1.12
LPCAT3-206ENST00000537179 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
LPCAT3-206ENST00000537179 AMELXQ99217 191 aa8.04□□□□□ -1.12
LPCAT3-206ENST00000537179 NPYP01303 97 aa8.03□□□□□ -1.12
LPCAT3-206ENST00000537179 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
LPCAT3-206ENST00000537179 NEBP20929 6669 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 COX19Q49B96 90 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 ANAPC16Q96DE5 110 aa8.02□□□□□ -1.13
LPCAT3-206ENST00000537179 D6R8Y8 96 aa8.01□□□□□ -1.13
LPCAT3-206ENST00000537179 HERVK_113P63121 156 aa8.01□□□□□ -1.13
LPCAT3-206ENST00000537179 C2orf66Q6UXQ4 117 aa8.01□□□□□ -1.13
LPCAT3-206ENST00000537179 SMIM1B2RUZ4 78 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 TAX1BP3O14907 124 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 HERV-K104P63124 156 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 PMCHL1Q16048 86 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 SPATA45Q537H7 98 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 MRPL54Q6P161 138 aaKnown RBP8□□□□□ -1.13
LPCAT3-206ENST00000537179 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 Q8NDZ9 215 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 COX7B2Q8TF08 81 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 VCX2Q9H322 139 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 PAM16Q9Y3D7 125 aa8□□□□□ -1.13
LPCAT3-206ENST00000537179 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
LPCAT3-206ENST00000537179 J3QR89 54 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms