RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 IL17DQ8TAD2 202 aa9.74□□□□□ -0.85
LIG1-203ENST00000536218 F8P00451 2351 aa9.73□□□□□ -0.85
LIG1-203ENST00000536218 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
LIG1-203ENST00000536218 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
LIG1-203ENST00000536218 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.86
LIG1-203ENST00000536218 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
LIG1-203ENST00000536218 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
LIG1-203ENST00000536218 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
LIG1-203ENST00000536218 TM2D3Q9BRN9 247 aa9.7□□□□□ -0.86
LIG1-203ENST00000536218 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 K7EQD1 137 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 TMEM256-PLSCR3K7ERE1 68 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
LIG1-203ENST00000536218 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
LIG1-203ENST00000536218 CSNK1G2-AS1Q8NCQ2 148 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 C16orf74Q96GX8 76 aa9.69□□□□□ -0.86
LIG1-203ENST00000536218 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
LIG1-203ENST00000536218 UBE2L6O14933 153 aa9.68□□□□□ -0.86
LIG1-203ENST00000536218 MIFP14174 115 aa9.68□□□□□ -0.86
LIG1-203ENST00000536218 CDC42SE2Q9NRR3 84 aa9.68□□□□□ -0.86
LIG1-203ENST00000536218 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
LIG1-203ENST00000536218 M0R2N4 97 aa9.67□□□□□ -0.86
LIG1-203ENST00000536218 Q8N3U1 123 aa9.67□□□□□ -0.86
LIG1-203ENST00000536218 Q8N814 137 aa9.67□□□□□ -0.86
LIG1-203ENST00000536218 LAMTOR3Q9UHA4 124 aa9.67□□□□□ -0.86
LIG1-203ENST00000536218 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
LIG1-203ENST00000536218 A0A087WZ39 114 aa9.65□□□□□ -0.86
LIG1-203ENST00000536218 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
LIG1-203ENST00000536218 DEFB4AO15263 64 aa9.65□□□□□ -0.86
LIG1-203ENST00000536218 Q6ZVQ6 151 aa9.64□□□□□ -0.87
LIG1-203ENST00000536218 NDUFC1O43677 76 aa9.64□□□□□ -0.87
LIG1-203ENST00000536218 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
LIG1-203ENST00000536218 LRCOL1A6NCL2 159 aa9.62□□□□□ -0.87
LIG1-203ENST00000536218 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
LIG1-203ENST00000536218 BCE1O60756 84 aa9.62□□□□□ -0.87
LIG1-203ENST00000536218 PMAIP1Q13794 54 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 DEFB135Q30KP9 77 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 C9orf66Q5T8R8 295 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 TMEM254Q8TBM7 123 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 ATP5EP56381 51 aaPredicted RBP9.61□□□□□ -0.87
LIG1-203ENST00000536218 NREPQ16612 68 aa9.61□□□□□ -0.87
LIG1-203ENST00000536218 Q6ZQT0 140 aa9.6□□□□□ -0.87
LIG1-203ENST00000536218 A0A096LPF7 62 aa9.6□□□□□ -0.87
LIG1-203ENST00000536218 DAD1P61803 113 aa9.59□□□□□ -0.87
LIG1-203ENST00000536218 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
LIG1-203ENST00000536218 ESRGQ1W209 222 aa9.58□□□□□ -0.88
LIG1-203ENST00000536218 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
LIG1-203ENST00000536218 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
LIG1-203ENST00000536218 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
LIG1-203ENST00000536218 X6R8D5 127 aa9.57□□□□□ -0.88
LIG1-203ENST00000536218 STAB1Q9NY15 2570 aa9.56□□□□□ -0.88
LIG1-203ENST00000536218 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
LIG1-203ENST00000536218 BPY2O14599 106 aa9.55□□□□□ -0.88
LIG1-203ENST00000536218 GYPEP15421 78 aa9.55□□□□□ -0.88
LIG1-203ENST00000536218 Q8N9L7 120 aa9.55□□□□□ -0.88
LIG1-203ENST00000536218 RETNQ9HD89 108 aa9.55□□□□□ -0.88
LIG1-203ENST00000536218 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
LIG1-203ENST00000536218 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
LIG1-203ENST00000536218 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
LIG1-203ENST00000536218 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
LIG1-203ENST00000536218 PRYO14603 147 aa9.53□□□□□ -0.88
LIG1-203ENST00000536218 HTN3P15516 51 aa9.52□□□□□ -0.89
LIG1-203ENST00000536218 CXCL6P80162 114 aa9.52□□□□□ -0.89
LIG1-203ENST00000536218 MAST4O15021 2626 aa9.52□□□□□ -0.89
LIG1-203ENST00000536218 OXLD1Q5BKU9 147 aa9.52□□□□□ -0.89
LIG1-203ENST00000536218 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
LIG1-203ENST00000536218 PSPHP1O15172 72 aa9.5□□□□□ -0.89
LIG1-203ENST00000536218 CLPSL2Q6UWE3 100 aa9.5□□□□□ -0.89
LIG1-203ENST00000536218 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
LIG1-203ENST00000536218 APOC4P55056 127 aa9.5□□□□□ -0.89
LIG1-203ENST00000536218 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
LIG1-203ENST00000536218 Q6ZQY7 126 aa9.49□□□□□ -0.89
LIG1-203ENST00000536218 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
LIG1-203ENST00000536218 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
LIG1-203ENST00000536218 PRO0255Q9UI72 69 aa9.49□□□□□ -0.89
LIG1-203ENST00000536218 CELA1Q9UNI1 258 aa9.48□□□□□ -0.89
LIG1-203ENST00000536218 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
LIG1-203ENST00000536218 PRB2P02812 416 aaPredicted RBP9.47□□□□□ -0.89
LIG1-203ENST00000536218 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
LIG1-203ENST00000536218 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
LIG1-203ENST00000536218 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
LIG1-203ENST00000536218 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
LIG1-203ENST00000536218 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
LIG1-203ENST00000536218 Q6ZTC4 211 aa9.46□□□□□ -0.9
LIG1-203ENST00000536218 PKD1L1Q8TDX9 2849 aa9.45□□□□□ -0.9
LIG1-203ENST00000536218 NOTCH1P46531 2555 aa9.45□□□□□ -0.9
LIG1-203ENST00000536218 KRTAP24-1Q3LI83 254 aa9.45□□□□□ -0.9
LIG1-203ENST00000536218 LYRM9A8MSI8 78 aa9.45□□□□□ -0.9
LIG1-203ENST00000536218 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
LIG1-203ENST00000536218 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
LIG1-203ENST00000536218 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
LIG1-203ENST00000536218 Q8NAQ8 132 aa9.43□□□□□ -0.9
LIG1-203ENST00000536218 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
LIG1-203ENST00000536218 Q6ZRU5 148 aa9.42□□□□□ -0.9
LIG1-203ENST00000536218 PDE6GP18545 87 aa9.42□□□□□ -0.9
LIG1-203ENST00000536218 Q8NDZ9 215 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms