RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 GAGE10A6NGK3 116 aa11.48□□□□□ -0.57
CACNB3-202ENST00000536187 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
CACNB3-202ENST00000536187 K7EP34 96 aa11.48□□□□□ -0.57
CACNB3-202ENST00000536187 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
CACNB3-202ENST00000536187 HIGD1BQ9P298 99 aa11.48□□□□□ -0.57
CACNB3-202ENST00000536187 A0A096LNI7 61 aa11.47□□□□□ -0.57
CACNB3-202ENST00000536187 TIMM17BO60830 172 aa11.47□□□□□ -0.57
CACNB3-202ENST00000536187 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
CACNB3-202ENST00000536187 VPS25Q9BRG1 176 aa11.47□□□□□ -0.57
CACNB3-202ENST00000536187 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
CACNB3-202ENST00000536187 LINC00336Q6ZUF6 198 aa11.46□□□□□ -0.57
CACNB3-202ENST00000536187 TMEM238C9JI98 176 aa11.46□□□□□ -0.58
CACNB3-202ENST00000536187 COX17Q14061 63 aa11.46□□□□□ -0.58
CACNB3-202ENST00000536187 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.58
CACNB3-202ENST00000536187 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.58
CACNB3-202ENST00000536187 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.58
CACNB3-202ENST00000536187 SPANXCQ9NY87 97 aa11.46□□□□□ -0.58
CACNB3-202ENST00000536187 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
CACNB3-202ENST00000536187 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
CACNB3-202ENST00000536187 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
CACNB3-202ENST00000536187 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
CACNB3-202ENST00000536187 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
CACNB3-202ENST00000536187 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
CACNB3-202ENST00000536187 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
CACNB3-202ENST00000536187 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
CACNB3-202ENST00000536187 HIST1H4GQ99525 98 aa11.44□□□□□ -0.58
CACNB3-202ENST00000536187 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
CACNB3-202ENST00000536187 FAM168BA1KXE4 195 aa11.43□□□□□ -0.58
CACNB3-202ENST00000536187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
CACNB3-202ENST00000536187 A0A1W2PPM0 123 aa11.42□□□□□ -0.58
CACNB3-202ENST00000536187 H3BUT2 72 aa11.42□□□□□ -0.58
CACNB3-202ENST00000536187 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
CACNB3-202ENST00000536187 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
CACNB3-202ENST00000536187 FXYD2P54710 66 aa11.4□□□□□ -0.58
CACNB3-202ENST00000536187 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
CACNB3-202ENST00000536187 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
CACNB3-202ENST00000536187 GCSHP23434 173 aa11.4□□□□□ -0.59
CACNB3-202ENST00000536187 C16orf90A8MZG2 172 aa11.39□□□□□ -0.59
CACNB3-202ENST00000536187 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
CACNB3-202ENST00000536187 CEND1Q8N111 149 aa11.38□□□□□ -0.59
CACNB3-202ENST00000536187 FAM30AQ9NZY2 134 aa11.38□□□□□ -0.59
CACNB3-202ENST00000536187 SPCS1Q9Y6A9 102 aa11.38□□□□□ -0.59
CACNB3-202ENST00000536187 FABP2P12104 132 aa11.38□□□□□ -0.59
CACNB3-202ENST00000536187 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
CACNB3-202ENST00000536187 TAL2Q16559 108 aa11.37□□□□□ -0.59
CACNB3-202ENST00000536187 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
CACNB3-202ENST00000536187 A0A1W2PNN7 141 aa11.36□□□□□ -0.59
CACNB3-202ENST00000536187 A4D1N5 150 aa11.36□□□□□ -0.59
CACNB3-202ENST00000536187 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
CACNB3-202ENST00000536187 HAMPP81172 84 aa11.35□□□□□ -0.59
CACNB3-202ENST00000536187 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
CACNB3-202ENST00000536187 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
CACNB3-202ENST00000536187 IFITM1P13164 125 aa11.34□□□□□ -0.59
CACNB3-202ENST00000536187 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
CACNB3-202ENST00000536187 RAB37Q96AX2 223 aa11.34□□□□□ -0.59
CACNB3-202ENST00000536187 APOBP04114 4563 aaKnown RBP11.34□□□□□ -0.59
CACNB3-202ENST00000536187 FAM19A5Q7Z5A7 132 aaPredicted RBP11.34□□□□□ -0.59
CACNB3-202ENST00000536187 VPREB1P12018 145 aa11.33□□□□□ -0.6
CACNB3-202ENST00000536187 NCR3O14931 201 aa11.32□□□□□ -0.6
CACNB3-202ENST00000536187 NAA38Q9BRA0 125 aaKnown RBP11.32□□□□□ -0.6
CACNB3-202ENST00000536187 K7ERJ3 54 aa11.31□□□□□ -0.6
CACNB3-202ENST00000536187 CFC1BP0CG36 223 aa11.29□□□□□ -0.6
CACNB3-202ENST00000536187 CFC1P0CG37 223 aa11.29□□□□□ -0.6
CACNB3-202ENST00000536187 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
CACNB3-202ENST00000536187 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
CACNB3-202ENST00000536187 A0A087WYN8 130 aa11.29□□□□□ -0.6
CACNB3-202ENST00000536187 Q6ZSA8 131 aa11.29□□□□□ -0.6
CACNB3-202ENST00000536187 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
CACNB3-202ENST00000536187 PPDPFQ9H3Y8 114 aa11.27□□□□□ -0.61
CACNB3-202ENST00000536187 NDUFC2O95298 119 aa11.26□□□□□ -0.61
CACNB3-202ENST00000536187 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
CACNB3-202ENST00000536187 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
CACNB3-202ENST00000536187 A0A1B0GWB2 263 aa11.25□□□□□ -0.61
CACNB3-202ENST00000536187 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
CACNB3-202ENST00000536187 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
CACNB3-202ENST00000536187 F8W1H4 67 aa11.25□□□□□ -0.61
CACNB3-202ENST00000536187 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
CACNB3-202ENST00000536187 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
CACNB3-202ENST00000536187 M0QXV9 152 aa11.24□□□□□ -0.61
CACNB3-202ENST00000536187 SCXQ7RTU7 201 aa11.24□□□□□ -0.61
CACNB3-202ENST00000536187 CIRBP-AS1Q8TBR5 109 aa11.24□□□□□ -0.61
CACNB3-202ENST00000536187 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
CACNB3-202ENST00000536187 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
CACNB3-202ENST00000536187 COPS9Q8WXC6 57 aa11.23□□□□□ -0.61
CACNB3-202ENST00000536187 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
CACNB3-202ENST00000536187 RPL37AP8A6NKH3 93 aa11.22□□□□□ -0.61
CACNB3-202ENST00000536187 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
CACNB3-202ENST00000536187 PLAC8Q9NZF1 115 aa11.22□□□□□ -0.61
CACNB3-202ENST00000536187 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.61
CACNB3-202ENST00000536187 J3QR89 54 aa11.21□□□□□ -0.61
CACNB3-202ENST00000536187 SCGB1A1P11684 91 aa11.21□□□□□ -0.61
CACNB3-202ENST00000536187 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
CACNB3-202ENST00000536187 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
CACNB3-202ENST00000536187 TMEM238LA0A1B0GVL6 79 aa11.21□□□□□ -0.62
CACNB3-202ENST00000536187 A6NJY4 79 aa11.21□□□□□ -0.62
CACNB3-202ENST00000536187 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.62
CACNB3-202ENST00000536187 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
CACNB3-202ENST00000536187 H7C2G1 150 aa11.19□□□□□ -0.62
CACNB3-202ENST00000536187 M0R378 163 aa11.19□□□□□ -0.62
CACNB3-202ENST00000536187 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms