RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DPH3P1Q9H4G8 78 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 NPVFQ9HCQ7 196 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 LINC01558Q9Y6Z2 57 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 DNAH17Q9UFH2 4485 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 MYH8P13535 1937 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 DOCK2Q92608 1830 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 LRRC37A2A6NM11 1700 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 TULP4Q9NRJ4 1543 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 NCOA3Q9Y6Q9 1424 aa0.12□□□□□ -2.39
PRKDC-205ENST00000535375 KDM3BQ7LBC6 1761 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 VPS13DQ5THJ4 4388 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 ZNF236Q9UL36 1845 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 UBE2L5PA0A1B0GUS4 154 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 IGLC7A0M8Q6 106 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 F6UZH7 168 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 F8VRH5 84 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 UQCR11O14957 56 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 GNG4P50150 75 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 UBE2L3P68036 154 aaKnown RBP0.11□□□□□ -2.39
PRKDC-205ENST00000535375 COX17Q14061 63 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 BAGE2Q86Y30 109 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 TMEM203Q969S6 136 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 AKAP6Q13023 2319 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 ADAMTS12P58397 1594 aa0.11□□□□□ -2.39
PRKDC-205ENST00000535375 WDR7Q9Y4E6 1490 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 SNAPC5O75971 98 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 PRO0255Q9UI72 69 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 PLCE1Q9P212 2302 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 C10orf71Q711Q0 1435 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 PLXNB2O15031 1838 aa0.1□□□□□ -2.39
PRKDC-205ENST00000535375 MARF1Q9Y4F3 1742 aaKnown RBP0.1□□□□□ -2.39
PRKDC-205ENST00000535375 DNAH2Q9P225 4427 aa0.09□□□□□ -2.39
PRKDC-205ENST00000535375 LOC285095A0A1B0GVY8 99 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 BCE1O60756 84 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 MYOZ3Q8TDC0 251 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 CDC42SE2Q9NRR3 84 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 U3KQA8 63 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 EIF4G3O43432 1585 aaKnown RBP0.09□□□□□ -2.4
PRKDC-205ENST00000535375 CACNA1CQ13936 2221 aa0.09□□□□□ -2.4
PRKDC-205ENST00000535375 CROCC2H7BZ55 1655 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 KIF21AQ7Z4S6 1674 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 ATP5EP56381 51 aaPredicted RBP0.08□□□□□ -2.4
PRKDC-205ENST00000535375 PPP3R1P63098 170 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 TMEM170BQ5T4T1 132 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 ADCY10Q96PN6 1610 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 RNF17Q9BXT8 1623 aaKnown RBP0.08□□□□□ -2.4
PRKDC-205ENST00000535375 WNK3Q9BYP7 1800 aa0.08□□□□□ -2.4
PRKDC-205ENST00000535375 URB1O60287 2271 aaKnown RBP0.07□□□□□ -2.4
PRKDC-205ENST00000535375 UGGT1Q9NYU2 1555 aa0.07□□□□□ -2.4
PRKDC-205ENST00000535375 FAM24AA6NFZ4 105 aa0.07□□□□□ -2.4
PRKDC-205ENST00000535375 HAMPP81172 84 aa0.07□□□□□ -2.4
PRKDC-205ENST00000535375 GNG8Q9UK08 70 aa0.07□□□□□ -2.4
PRKDC-205ENST00000535375 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
PRKDC-205ENST00000535375 TSC2P49815 1807 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 PZPP20742 1482 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 I3L2K1 104 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 APOC3P02656 99 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 FAM167A-AS1Q96KT0 104 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 MAP3K1Q13233 1512 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 ARHGEF5Q12774 1597 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 PEG3Q9GZU2 1588 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 DNAH11Q96DT5 4516 aa0.06□□□□□ -2.4
PRKDC-205ENST00000535375 GAPVD1Q14C86 1478 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 SPHKAPQ2M3C7 1700 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 EPRSP07814 1512 aaKnown RBP0.05□□□□□ -2.4
PRKDC-205ENST00000535375 CHKB-CPT1BH3BT56 60 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 SFT2D2O95562 160 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 DCDP81605 110 aaKnown RBP0.05□□□□□ -2.4
PRKDC-205ENST00000535375 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 SPCS1Q9Y6A9 102 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 SHPRHQ149N8 1683 aa0.05□□□□□ -2.4
PRKDC-205ENST00000535375 EEA1Q15075 1411 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 SCAPERQ9BY12 1400 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 ANKRD26Q9UPS8 1709 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 DNAH8Q96JB1 4490 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 PSME4Q14997 1843 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 Q6JHZ5 121 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 SPRR4Q96PI1 79 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 ZNF831Q5JPB2 1677 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 RGPD1P0DJD0 1748 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 SCN11AQ9UI33 1791 aa0.04□□□□□ -2.4
PRKDC-205ENST00000535375 MAGI2Q86UL8 1455 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 CPS1P31327 1500 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 PAPPAQ13219 1627 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 TNRC6CQ9HCJ0 1690 aaKnown RBP0.03□□□□□ -2.4
PRKDC-205ENST00000535375 TRAV22A0A0B4J277 110 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 IFITM1P13164 125 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 S100A1P23297 94 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 MRPS10P82664 201 aaKnown RBP0.03□□□□□ -2.4
PRKDC-205ENST00000535375 SVBPQ8N300 66 aa0.03□□□□□ -2.4
PRKDC-205ENST00000535375 SBF2Q86WG5 1849 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 H3BQ15 152 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 M0R3E3 92 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 UBE2D3P61077 147 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 UBE2D2P62837 147 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 WFDC2Q14508 124 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 Q8IZM0 81 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 TP53AIP1Q9HCN2 124 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 NXT2Q9NPJ8 142 aaKnown RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms