RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TSPAN13O95857 204 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 APOC3P02656 99 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 UBE2AP49459 152 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 SVBPQ8N300 66 aa5.87□□□□□ -1.47
CLSTN3-203ENST00000534830 TMEM223A0PJW6 202 aa5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 M0R378 163 aa5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 RPL24P83731 157 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 CHCHD1Q96BP2 118 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 TMEM126AQ9H061 195 aa5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-203ENST00000534830 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
CLSTN3-203ENST00000534830 CTAG1AP78358 180 aa5.84□□□□□ -1.47
CLSTN3-203ENST00000534830 PRLHP81277 87 aa5.84□□□□□ -1.47
CLSTN3-203ENST00000534830 NDUFA5Q16718 116 aa5.84□□□□□ -1.47
CLSTN3-203ENST00000534830 IFI27L1Q96BM0 104 aa5.84□□□□□ -1.47
CLSTN3-203ENST00000534830 PLEKHB2Q96CS7 222 aa5.84□□□□□ -1.47
CLSTN3-203ENST00000534830 FAM19A1Q7Z5A9 133 aa5.83□□□□□ -1.48
CLSTN3-203ENST00000534830 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
CLSTN3-203ENST00000534830 LINC00158P58513 81 aa5.82□□□□□ -1.48
CLSTN3-203ENST00000534830 CBLN2Q8IUK8 224 aa5.81□□□□□ -1.48
CLSTN3-203ENST00000534830 LINC00304Q8N9R0 145 aa5.81□□□□□ -1.48
CLSTN3-203ENST00000534830 IGKV2D-26A0A0A0MRZ7 120 aa5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 SMIM13P0DJ93 91 aa5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 SPRR1AP35321 89 aa5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 LINC01547P58512 204 aaPredicted RBP5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 FAM19A2Q8N3H0 131 aa5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 CDIP1Q9H305 208 aa5.8□□□□□ -1.48
CLSTN3-203ENST00000534830 LOC107984156A0A0G2JMH3 177 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 A0A0U1RRA0 63 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 LINC00310P59036 64 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 HERV-K104P63124 156 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 ARL17AQ8IVW1 177 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 C3orf22Q8N5N4 141 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 KCNQ1DNQ9H478 68 aa5.79□□□□□ -1.48
CLSTN3-203ENST00000534830 PRYO14603 147 aa5.78□□□□□ -1.48
CLSTN3-203ENST00000534830 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
CLSTN3-203ENST00000534830 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
CLSTN3-203ENST00000534830 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 LINC00587B1AMM8 73 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 HSBP1O75506 76 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 TRGC2P03986 189 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 BOD1L2Q8IYS8 172 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 RETNLBQ9BQ08 111 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
CLSTN3-203ENST00000534830 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
CLSTN3-203ENST00000534830 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
CLSTN3-203ENST00000534830 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
CLSTN3-203ENST00000534830 NCR3O14931 201 aa5.75□□□□□ -1.49
CLSTN3-203ENST00000534830 LEPROTO15243 131 aa5.75□□□□□ -1.49
CLSTN3-203ENST00000534830 SERF1AO75920 110 aa5.75□□□□□ -1.49
CLSTN3-203ENST00000534830 LEPROTL1O95214 131 aa5.75□□□□□ -1.49
CLSTN3-203ENST00000534830 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
CLSTN3-203ENST00000534830 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
CLSTN3-203ENST00000534830 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
CLSTN3-203ENST00000534830 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
CLSTN3-203ENST00000534830 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-203ENST00000534830 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
CLSTN3-203ENST00000534830 H0Y8G0 127 aa5.73□□□□□ -1.49
CLSTN3-203ENST00000534830 MAP1LC3CQ9BXW4 147 aa5.73□□□□□ -1.49
CLSTN3-203ENST00000534830 TRBV10-2A0A0K0K1G8 114 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 COLCA2A8K830 154 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 B5MCH6 92 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 J3QQQ9 107 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 PLNP26678 52 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 DAND5Q8N907 189 aa5.72□□□□□ -1.49
CLSTN3-203ENST00000534830 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.5
CLSTN3-203ENST00000534830 S100A1P23297 94 aa5.71□□□□□ -1.5
CLSTN3-203ENST00000534830 NMUP48645 174 aa5.71□□□□□ -1.5
CLSTN3-203ENST00000534830 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
CLSTN3-203ENST00000534830 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
CLSTN3-203ENST00000534830 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 DPM2O94777 84 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 NDUFC2O95298 119 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 IGKCP01834 107 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 Q8NBF4 154 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 Q9BRP9 147 aa5.7□□□□□ -1.5
CLSTN3-203ENST00000534830 IGLV6-57P01721 117 aa5.69□□□□□ -1.5
CLSTN3-203ENST00000534830 FABP4P15090 132 aa5.69□□□□□ -1.5
CLSTN3-203ENST00000534830 DDTP30046 118 aa5.69□□□□□ -1.5
CLSTN3-203ENST00000534830 SOSTDC1Q6X4U4 206 aa5.69□□□□□ -1.5
CLSTN3-203ENST00000534830 PMCHL2Q9BQD1 86 aa5.69□□□□□ -1.5
CLSTN3-203ENST00000534830 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 SPINK1P00995 79 aa5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 HERVK_113P61574 105 aa5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 C4orf48Q5BLP8 95 aa5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 ADAMTSL4-AS1Q5T5F5 129 aa5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 SPANXB1Q9NS25 103 aaPredicted RBP5.68□□□□□ -1.5
CLSTN3-203ENST00000534830 A0A0J9YXY3 114 aa5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 E9PLD3 99 aa5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 LGALS3P17931 250 aaKnown RBP5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 S100A12P80511 92 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms