RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 LEPROTO15243 131 aa7.28□□□□□ -1.24
CTNND1-238ENST00000534647 BATFQ16520 125 aa7.28□□□□□ -1.24
CTNND1-238ENST00000534647 FAM19A3Q7Z5A8 133 aa7.28□□□□□ -1.24
CTNND1-238ENST00000534647 LINC01600Q96MT4 127 aa7.28□□□□□ -1.24
CTNND1-238ENST00000534647 IGKV3OR2-268A0A0C4DH90 116 aa7.27□□□□□ -1.25
CTNND1-238ENST00000534647 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
CTNND1-238ENST00000534647 C7orf33Q8WU49 177 aa7.27□□□□□ -1.25
CTNND1-238ENST00000534647 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
CTNND1-238ENST00000534647 J3QQQ9 107 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 HINT1P49773 126 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-238ENST00000534647 HSD52Q0P140 79 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 SS18Q15532 418 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 LINC00242Q5T6M2 205 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 SCGB1D4Q6XE38 83 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 C2orf91Q6ZV80 131 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
CTNND1-238ENST00000534647 IGLV5-45A0A087WSX0 123 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 A0A087WZ39 114 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 IGHV1-58A0A0C4DH39 117 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 CCL25O15444 150 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 RPL24P83731 157 aaKnown RBP7.25□□□□□ -1.25
CTNND1-238ENST00000534647 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
CTNND1-238ENST00000534647 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
CTNND1-238ENST00000534647 COX6A2Q02221 97 aa7.24□□□□□ -1.25
CTNND1-238ENST00000534647 MPLKIPQ8TAP9 179 aa7.24□□□□□ -1.25
CTNND1-238ENST00000534647 CDKN2A-AS1Q9UH64 79 aa7.24□□□□□ -1.25
CTNND1-238ENST00000534647 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
CTNND1-238ENST00000534647 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-238ENST00000534647 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 TAL2Q16559 108 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 BVES-AS1Q5T3Y7 98 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 HIST1H4GQ99525 98 aa7.22□□□□□ -1.25
CTNND1-238ENST00000534647 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
CTNND1-238ENST00000534647 SPINK6Q6UWN8 80 aa7.21□□□□□ -1.26
CTNND1-238ENST00000534647 PRR26Q8N8Z3 221 aa7.21□□□□□ -1.26
CTNND1-238ENST00000534647 LINC00474Q9P2X8 69 aa7.21□□□□□ -1.26
CTNND1-238ENST00000534647 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
CTNND1-238ENST00000534647 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
CTNND1-238ENST00000534647 RPL13AP40429 203 aaKnown RBP7.2□□□□□ -1.26
CTNND1-238ENST00000534647 Q6ZVQ6 151 aa7.2□□□□□ -1.26
CTNND1-238ENST00000534647 ORAOV1Q8WV07 137 aa7.2□□□□□ -1.26
CTNND1-238ENST00000534647 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-238ENST00000534647 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
CTNND1-238ENST00000534647 PKIGQ9Y2B9 76 aa7.2□□□□□ -1.26
CTNND1-238ENST00000534647 IGLV5-39A0A0G2JS06 123 aa7.19□□□□□ -1.26
CTNND1-238ENST00000534647 A6NDN8 102 aa7.19□□□□□ -1.26
CTNND1-238ENST00000534647 XCL1P47992 114 aa7.19□□□□□ -1.26
CTNND1-238ENST00000534647 LRP2P98164 4655 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 REG3GQ6UW15 175 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 C5orf38Q86SI9 138 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 CEND1Q8N111 149 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
CTNND1-238ENST00000534647 A0A096LNI7 61 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 IGLV9-49A0A0B4J1Y8 123 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 IGHV3OR16-9A0A0B4J2B5 98 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 NDUFA1O15239 70 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-238ENST00000534647 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
CTNND1-238ENST00000534647 A0A0J9YXY3 114 aa7.16□□□□□ -1.26
CTNND1-238ENST00000534647 COX7A2LO14548 114 aa7.16□□□□□ -1.26
CTNND1-238ENST00000534647 PRSS2P07478 247 aa7.16□□□□□ -1.26
CTNND1-238ENST00000534647 Q6ZRP5 223 aa7.16□□□□□ -1.26
CTNND1-238ENST00000534647 IGLV5-37A0A075B6J1 123 aa7.15□□□□□ -1.26
CTNND1-238ENST00000534647 APOMO95445 188 aa7.15□□□□□ -1.26
CTNND1-238ENST00000534647 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.26
CTNND1-238ENST00000534647 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
CTNND1-238ENST00000534647 TIMM17BO60830 172 aa7.14□□□□□ -1.27
CTNND1-238ENST00000534647 SMIM13P0DJ93 91 aa7.14□□□□□ -1.27
CTNND1-238ENST00000534647 FXYD2P54710 66 aa7.14□□□□□ -1.27
CTNND1-238ENST00000534647 Q6ZVH6 145 aa7.14□□□□□ -1.27
CTNND1-238ENST00000534647 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
CTNND1-238ENST00000534647 A0A1B0GV90 55 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 Q8IZM0 81 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 COPS9Q8WXC6 57 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 ZNF625Q96I27 306 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-238ENST00000534647 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 SPANXDQ9BXN6 97 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
CTNND1-238ENST00000534647 SPANXCQ9NY87 97 aa7.12□□□□□ -1.27
CTNND1-238ENST00000534647 CXCL5P42830 114 aa7.11□□□□□ -1.27
CTNND1-238ENST00000534647 CKS1BP61024 79 aa7.11□□□□□ -1.27
CTNND1-238ENST00000534647 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
CTNND1-238ENST00000534647 RNF213Q63HN8 5207 aa7.1□□□□□ -1.27
CTNND1-238ENST00000534647 IFITM1P13164 125 aa7.1□□□□□ -1.27
CTNND1-238ENST00000534647 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
CTNND1-238ENST00000534647 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.27
CTNND1-238ENST00000534647 TAX1BP3O14907 124 aa7.09□□□□□ -1.27
CTNND1-238ENST00000534647 RAB37Q96AX2 223 aa7.09□□□□□ -1.27
CTNND1-238ENST00000534647 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms