RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 H0Y9J4 135 aa7.6□□□□□ -1.19
USF1-211ENST00000534633 LEPROTO15243 131 aa7.6□□□□□ -1.19
USF1-211ENST00000534633 PFN2P35080 140 aa7.6□□□□□ -1.19
USF1-211ENST00000534633 KRTDAPP60985 99 aa7.6□□□□□ -1.19
USF1-211ENST00000534633 SNRPEP62304 92 aaKnown RBP7.6□□□□□ -1.19
USF1-211ENST00000534633 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
USF1-211ENST00000534633 C5orf52A6NGY3 159 aa7.59□□□□□ -1.19
USF1-211ENST00000534633 FAM19A5Q7Z5A7 132 aaPredicted RBP7.59□□□□□ -1.19
USF1-211ENST00000534633 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
USF1-211ENST00000534633 J3QQQ9 107 aa7.58□□□□□ -1.2
USF1-211ENST00000534633 COX17Q14061 63 aa7.58□□□□□ -1.2
USF1-211ENST00000534633 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
USF1-211ENST00000534633 LPAP08519 4548 aa7.58□□□□□ -1.2
USF1-211ENST00000534633 IGLV1-50A0A075B6I6 118 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 E9PLD3 99 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 Q8NDZ9 215 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 C22orf24Q9Y442 160 aa7.57□□□□□ -1.2
USF1-211ENST00000534633 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
USF1-211ENST00000534633 A0A0U1RRA0 63 aa7.56□□□□□ -1.2
USF1-211ENST00000534633 S100A6P06703 90 aa7.56□□□□□ -1.2
USF1-211ENST00000534633 SMIM13P0DJ93 91 aa7.56□□□□□ -1.2
USF1-211ENST00000534633 M0QXV9 152 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 S100A2P29034 98 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 LINC00158P58513 81 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 HERVK_113P61574 105 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 HERV-K104P63124 156 aa7.55□□□□□ -1.2
USF1-211ENST00000534633 MYMXA0A1B0GTQ4 84 aa7.54□□□□□ -1.2
USF1-211ENST00000534633 UBE2BP63146 152 aa7.54□□□□□ -1.2
USF1-211ENST00000534633 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
USF1-211ENST00000534633 IGLV5-37A0A075B6J1 123 aa7.53□□□□□ -1.2
USF1-211ENST00000534633 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
USF1-211ENST00000534633 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
USF1-211ENST00000534633 VPREB1P12018 145 aa7.52□□□□□ -1.21
USF1-211ENST00000534633 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.21
USF1-211ENST00000534633 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
USF1-211ENST00000534633 NMUP48645 174 aa7.52□□□□□ -1.21
USF1-211ENST00000534633 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
USF1-211ENST00000534633 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
USF1-211ENST00000534633 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
USF1-211ENST00000534633 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
USF1-211ENST00000534633 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
USF1-211ENST00000534633 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
USF1-211ENST00000534633 DAND5Q8N907 189 aa7.51□□□□□ -1.21
USF1-211ENST00000534633 LINC00167Q96N53 147 aa7.51□□□□□ -1.21
USF1-211ENST00000534633 C20orf202A1L168 122 aa7.5□□□□□ -1.21
USF1-211ENST00000534633 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
USF1-211ENST00000534633 LITAFQ99732 161 aa7.49□□□□□ -1.21
USF1-211ENST00000534633 LOC107984156A0A0G2JMH3 177 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 GAGE10A6NGK3 116 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 RPL37AP8A6NKH3 93 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 PRR4Q16378 134 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
USF1-211ENST00000534633 ARL17AQ8IVW1 177 aa7.48□□□□□ -1.21
USF1-211ENST00000534633 ZNF861PO60384 105 aa7.47□□□□□ -1.21
USF1-211ENST00000534633 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
USF1-211ENST00000534633 PCP2Q8IVA1 136 aa7.47□□□□□ -1.21
USF1-211ENST00000534633 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
USF1-211ENST00000534633 ZNF815PA8K554 130 aa7.45□□□□□ -1.22
USF1-211ENST00000534633 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
USF1-211ENST00000534633 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
USF1-211ENST00000534633 IGKV2-28A0A075B6P5 120 aa7.44□□□□□ -1.22
USF1-211ENST00000534633 IGKV2D-28P01615 120 aa7.44□□□□□ -1.22
USF1-211ENST00000534633 AKR1D1P51857 326 aa7.44□□□□□ -1.22
USF1-211ENST00000534633 TIMM17BO60830 172 aa7.43□□□□□ -1.22
USF1-211ENST00000534633 SCGB1D1O95968 90 aa7.43□□□□□ -1.22
USF1-211ENST00000534633 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
USF1-211ENST00000534633 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
USF1-211ENST00000534633 TMEM238C9JI98 176 aa7.42□□□□□ -1.22
USF1-211ENST00000534633 M0R378 163 aa7.42□□□□□ -1.22
USF1-211ENST00000534633 NPC2P61916 151 aa7.42□□□□□ -1.22
USF1-211ENST00000534633 NCR3O14931 201 aa7.41□□□□□ -1.22
USF1-211ENST00000534633 BCE1O60756 84 aa7.41□□□□□ -1.22
USF1-211ENST00000534633 RPL28P46779 137 aaKnown RBP7.41□□□□□ -1.22
USF1-211ENST00000534633 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
USF1-211ENST00000534633 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
USF1-211ENST00000534633 KRTAP13-1Q8IUC0 172 aa7.4□□□□□ -1.22
USF1-211ENST00000534633 TMEM126AQ9H061 195 aa7.4□□□□□ -1.22
USF1-211ENST00000534633 A0A087X002 238 aa7.39□□□□□ -1.23
USF1-211ENST00000534633 NDUFC2O95298 119 aa7.39□□□□□ -1.23
USF1-211ENST00000534633 TSPAN13O95857 204 aa7.39□□□□□ -1.23
USF1-211ENST00000534633 TRBV10-3A0A0K0K1G6 114 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 CRYGAP11844 174 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 SPANXDQ9BXN6 97 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 SPANXCQ9NY87 97 aa7.38□□□□□ -1.23
USF1-211ENST00000534633 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
USF1-211ENST00000534633 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
USF1-211ENST00000534633 PYY3Q5JQD4 70 aa7.37□□□□□ -1.23
USF1-211ENST00000534633 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
USF1-211ENST00000534633 KCNQ1DNQ9H478 68 aa7.37□□□□□ -1.23
USF1-211ENST00000534633 MUC2Q02817 5179 aa7.36□□□□□ -1.23
USF1-211ENST00000534633 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
USF1-211ENST00000534633 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
USF1-211ENST00000534633 SPRR1AP35321 89 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms