RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 VCX2Q9H322 139 aa5.06□□□□□ -1.6
SOX9-AS1-213ENST00000533996 NAT8BQ9UHF3 227 aa5.06□□□□□ -1.6
SOX9-AS1-213ENST00000533996 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
SOX9-AS1-213ENST00000533996 SMLR1H3BR10 107 aa5.05□□□□□ -1.6
SOX9-AS1-213ENST00000533996 PCOTHQ58A44 107 aa5.05□□□□□ -1.6
SOX9-AS1-213ENST00000533996 HIGD2AQ9BW72 106 aa5.05□□□□□ -1.6
SOX9-AS1-213ENST00000533996 TMEM238C9JI98 176 aa5.04□□□□□ -1.6
SOX9-AS1-213ENST00000533996 D6R8Y8 96 aa5.04□□□□□ -1.6
SOX9-AS1-213ENST00000533996 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
SOX9-AS1-213ENST00000533996 CDKN2A-AS1Q9UH64 79 aa5.04□□□□□ -1.6
SOX9-AS1-213ENST00000533996 V9GYV3 84 aa5.04□□□□□ -1.6
SOX9-AS1-213ENST00000533996 F8W036 122 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 SCO1O75880 301 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 NPYP01303 97 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 FAM74A3Q4VXF1 159 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 CYSLTR1Q9Y271 337 aa5.03□□□□□ -1.6
SOX9-AS1-213ENST00000533996 S100A8P05109 93 aa5.02□□□□□ -1.61
SOX9-AS1-213ENST00000533996 RAB5BP61020 215 aa5.02□□□□□ -1.61
SOX9-AS1-213ENST00000533996 ZC2HC1BQ5TFG8 222 aa5.02□□□□□ -1.61
SOX9-AS1-213ENST00000533996 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
SOX9-AS1-213ENST00000533996 CFC1P0CG37 223 aa5.01□□□□□ -1.61
SOX9-AS1-213ENST00000533996 ORMDL3Q8N138 153 aa5.01□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SMIM7Q9BQ49 75 aa5.01□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SMIM27A0A1W2PRY6 76 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 IGIPA6NJ69 53 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 CEBPGP53567 150 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 LINC00483Q53H64 154 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 COX6B2Q6YFQ2 88 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SSPOA2VEC9 5147 aa5□□□□□ -1.61
SOX9-AS1-213ENST00000533996 USH2AO75445 5202 aa4.99□□□□□ -1.61
SOX9-AS1-213ENST00000533996 K7EMI3 77 aa4.99□□□□□ -1.61
SOX9-AS1-213ENST00000533996 ORMDL2Q53FV1 153 aa4.99□□□□□ -1.61
SOX9-AS1-213ENST00000533996 TMEM136Q6ZRR5 245 aa4.99□□□□□ -1.61
SOX9-AS1-213ENST00000533996 LAMTOR2Q9Y2Q5 125 aa4.99□□□□□ -1.61
SOX9-AS1-213ENST00000533996 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
SOX9-AS1-213ENST00000533996 ATP5LO75964 103 aa4.98□□□□□ -1.61
SOX9-AS1-213ENST00000533996 G0S2P27469 103 aa4.98□□□□□ -1.61
SOX9-AS1-213ENST00000533996 COX17Q14061 63 aa4.98□□□□□ -1.61
SOX9-AS1-213ENST00000533996 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
SOX9-AS1-213ENST00000533996 TINCRA0A1B0GVN0 87 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 AKAP14Q86UN6 197 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 Q8N8P6 123 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 MAP1LC3AQ9H492 121 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
SOX9-AS1-213ENST00000533996 IGLV5-45A0A087WSX0 123 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 A0A1B0GXF2 115 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 PFN2P35080 140 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 MOBPQ13875 183 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 SLC51BQ86UW2 128 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 TIMM17AQ99595 171 aa4.96□□□□□ -1.62
SOX9-AS1-213ENST00000533996 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
SOX9-AS1-213ENST00000533996 RAB14P61106 215 aa4.95□□□□□ -1.62
SOX9-AS1-213ENST00000533996 IGLV9-49A0A0B4J1Y8 123 aa4.94□□□□□ -1.62
SOX9-AS1-213ENST00000533996 MRPL54Q6P161 138 aaKnown RBP4.94□□□□□ -1.62
SOX9-AS1-213ENST00000533996 SRP19P09132 144 aaKnown RBP4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 SPRR1AP35321 89 aa4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 RPL23P62829 140 aaKnown RBP4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 RGS21Q2M5E4 152 aa4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 ATP5L2Q7Z4Y8 100 aa4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 ERG28Q9UKR5 140 aa4.93□□□□□ -1.62
SOX9-AS1-213ENST00000533996 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 ERASQ7Z444 233 aa4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 Q8NDZ9 215 aa4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 NXT2Q9NPJ8 142 aaKnown RBP4.92□□□□□ -1.62
SOX9-AS1-213ENST00000533996 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 LINC01549A6NIU2 74 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 H3BRM9 83 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 IGLV6-57P01721 117 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 ADIRFQ15847 76 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 KCNQ1DNQ9H478 68 aa4.91□□□□□ -1.62
SOX9-AS1-213ENST00000533996 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
SOX9-AS1-213ENST00000533996 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
SOX9-AS1-213ENST00000533996 NAT8Q9UHE5 227 aa4.9□□□□□ -1.63
SOX9-AS1-213ENST00000533996 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
SOX9-AS1-213ENST00000533996 SCGB3A1Q96QR1 104 aa4.89□□□□□ -1.63
SOX9-AS1-213ENST00000533996 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
SOX9-AS1-213ENST00000533996 TRAV9-1A0A075B6T8 112 aa4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 RPL37P61927 97 aaKnown RBP4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 S100A12P80511 92 aa4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 ALKAL2Q6UX46 152 aa4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 CST9LQ9H4G1 147 aa4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
SOX9-AS1-213ENST00000533996 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
SOX9-AS1-213ENST00000533996 PMVKQ15126 192 aa4.86□□□□□ -1.63
SOX9-AS1-213ENST00000533996 BATF3Q9NR55 127 aa4.86□□□□□ -1.63
SOX9-AS1-213ENST00000533996 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
SOX9-AS1-213ENST00000533996 ZNF625Q96I27 306 aaPredicted RBP4.85□□□□□ -1.63
SOX9-AS1-213ENST00000533996 C5orf52A6NGY3 159 aa4.84□□□□□ -1.63
SOX9-AS1-213ENST00000533996 ADCYAP1P18509 176 aa4.84□□□□□ -1.63
SOX9-AS1-213ENST00000533996 LINC00158P58513 81 aa4.84□□□□□ -1.63
SOX9-AS1-213ENST00000533996 PET117Q6UWS5 81 aa4.84□□□□□ -1.63
SOX9-AS1-213ENST00000533996 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms