RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 A6NJY4 79 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 RPL18AQ02543 176 aaKnown RBP10.28□□□□□ -0.76
TRIM3-213ENST00000533309 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 C9orf163Q8N9P6 203 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 Q8NDZ9 215 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
TRIM3-213ENST00000533309 K7ERJ3 54 aa10.27□□□□□ -0.77
TRIM3-213ENST00000533309 CFC1BP0CG36 223 aa10.27□□□□□ -0.77
TRIM3-213ENST00000533309 CFC1P0CG37 223 aa10.27□□□□□ -0.77
TRIM3-213ENST00000533309 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
TRIM3-213ENST00000533309 A6NDN8 102 aa10.26□□□□□ -0.77
TRIM3-213ENST00000533309 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
TRIM3-213ENST00000533309 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIM3-213ENST00000533309 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
TRIM3-213ENST00000533309 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
TRIM3-213ENST00000533309 A0A0B4J2C4 111 aa10.24□□□□□ -0.77
TRIM3-213ENST00000533309 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
TRIM3-213ENST00000533309 A0A096LNI7 61 aa10.23□□□□□ -0.77
TRIM3-213ENST00000533309 GAGE2BQ13066 116 aa10.23□□□□□ -0.77
TRIM3-213ENST00000533309 COL5A1-AS1Q5SY13 56 aa10.23□□□□□ -0.77
TRIM3-213ENST00000533309 NDUFC2O95298 119 aa10.22□□□□□ -0.77
TRIM3-213ENST00000533309 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
TRIM3-213ENST00000533309 RYR3Q15413 4870 aa10.21□□□□□ -0.77
TRIM3-213ENST00000533309 C16orf90A8MZG2 172 aa10.21□□□□□ -0.78
TRIM3-213ENST00000533309 KRTAP10-2P60368 255 aa10.21□□□□□ -0.78
TRIM3-213ENST00000533309 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.78
TRIM3-213ENST00000533309 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.78
TRIM3-213ENST00000533309 IGLV5-52A0A0A0MRZ9 124 aa10.2□□□□□ -0.78
TRIM3-213ENST00000533309 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
TRIM3-213ENST00000533309 VPREB1P12018 145 aa10.2□□□□□ -0.78
TRIM3-213ENST00000533309 PRO1854Q9UHT4 67 aa10.2□□□□□ -0.78
TRIM3-213ENST00000533309 LBHQ53QV2 105 aaPredicted RBP10.19□□□□□ -0.78
TRIM3-213ENST00000533309 RAB37Q96AX2 223 aa10.19□□□□□ -0.78
TRIM3-213ENST00000533309 DNAH8Q96JB1 4490 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 IGKV2-24A0A0C4DH68 120 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 KRTAP7-1Q8IUC3 87 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 FAM168BA1KXE4 195 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 NCR3O14931 201 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 PKIGQ9Y2B9 76 aa10.18□□□□□ -0.78
TRIM3-213ENST00000533309 LINC00336Q6ZUF6 198 aa10.17□□□□□ -0.78
TRIM3-213ENST00000533309 PANO1I0J062 215 aa10.16□□□□□ -0.78
TRIM3-213ENST00000533309 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
TRIM3-213ENST00000533309 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
TRIM3-213ENST00000533309 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
TRIM3-213ENST00000533309 TSPAN13O95857 204 aa10.15□□□□□ -0.78
TRIM3-213ENST00000533309 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.79
TRIM3-213ENST00000533309 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
TRIM3-213ENST00000533309 NAA38Q9BRA0 125 aaKnown RBP10.14□□□□□ -0.79
TRIM3-213ENST00000533309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
TRIM3-213ENST00000533309 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
TRIM3-213ENST00000533309 H7C2G1 150 aa10.13□□□□□ -0.79
TRIM3-213ENST00000533309 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
TRIM3-213ENST00000533309 FAM19A5Q7Z5A7 132 aaPredicted RBP10.12□□□□□ -0.79
TRIM3-213ENST00000533309 SPACA4Q8TDM5 124 aa10.12□□□□□ -0.79
TRIM3-213ENST00000533309 M0R378 163 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 OR13C6PQ8NH95 151 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 H3BUT2 72 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 IGLV6-57P01721 117 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 NKAPP1Q8N9T2 125 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 LINC00474Q9P2X8 69 aa10.11□□□□□ -0.79
TRIM3-213ENST00000533309 TRBV10-3A0A0K0K1G6 114 aa10.1□□□□□ -0.79
TRIM3-213ENST00000533309 C7orf33Q8WU49 177 aa10.1□□□□□ -0.79
TRIM3-213ENST00000533309 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
TRIM3-213ENST00000533309 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
TRIM3-213ENST00000533309 Q1RN00 199 aa10.09□□□□□ -0.79
TRIM3-213ENST00000533309 S100A7L2Q5SY68 101 aa10.09□□□□□ -0.79
TRIM3-213ENST00000533309 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
TRIM3-213ENST00000533309 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
TRIM3-213ENST00000533309 DYNC1H1Q14204 4646 aaKnown RBP10.08□□□□□ -0.8
TRIM3-213ENST00000533309 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
TRIM3-213ENST00000533309 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
TRIM3-213ENST00000533309 M0QXV9 152 aa10.07□□□□□ -0.8
TRIM3-213ENST00000533309 TRIAP1O43715 76 aa10.07□□□□□ -0.8
TRIM3-213ENST00000533309 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
TRIM3-213ENST00000533309 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
TRIM3-213ENST00000533309 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
TRIM3-213ENST00000533309 LINC00167Q96N53 147 aa10.06□□□□□ -0.8
TRIM3-213ENST00000533309 A0A087WYN8 130 aa10.05□□□□□ -0.8
TRIM3-213ENST00000533309 A0A1W2PPM0 123 aa10.05□□□□□ -0.8
TRIM3-213ENST00000533309 A0A1B0GV90 55 aa10.04□□□□□ -0.8
TRIM3-213ENST00000533309 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
TRIM3-213ENST00000533309 PSMB2P49721 201 aa10.04□□□□□ -0.8
TRIM3-213ENST00000533309 Q6ZSA8 131 aa10.04□□□□□ -0.8
TRIM3-213ENST00000533309 IGLV1-50A0A075B6I6 118 aa10.03□□□□□ -0.8
TRIM3-213ENST00000533309 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
TRIM3-213ENST00000533309 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
TRIM3-213ENST00000533309 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
TRIM3-213ENST00000533309 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
TRIM3-213ENST00000533309 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
TRIM3-213ENST00000533309 KCNQ1DNQ9H478 68 aa10.01□□□□□ -0.81
TRIM3-213ENST00000533309 FABP2P12104 132 aa10□□□□□ -0.81
TRIM3-213ENST00000533309 C6orf99Q4VX62 202 aa10□□□□□ -0.81
TRIM3-213ENST00000533309 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
TRIM3-213ENST00000533309 ZNF73O43830 326 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms