RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 J3QL48 77 aa7.43□□□□□ -1.22
COLCA1-203ENST00000532918 PRLHP81277 87 aa7.43□□□□□ -1.22
COLCA1-203ENST00000532918 Q8NAQ8 132 aa7.43□□□□□ -1.22
COLCA1-203ENST00000532918 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
COLCA1-203ENST00000532918 BCE1O60756 84 aa7.42□□□□□ -1.22
COLCA1-203ENST00000532918 A0A087WSZ3 146 aa7.42□□□□□ -1.22
COLCA1-203ENST00000532918 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
COLCA1-203ENST00000532918 CEP295Q9C0D2 2601 aa7.42□□□□□ -1.22
COLCA1-203ENST00000532918 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-203ENST00000532918 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
COLCA1-203ENST00000532918 FN1P02751 2386 aaKnown RBP7.4□□□□□ -1.22
COLCA1-203ENST00000532918 Q9UF83 564 aa7.4□□□□□ -1.23
COLCA1-203ENST00000532918 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
COLCA1-203ENST00000532918 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 LINC00167Q96N53 147 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 KLK9Q2XQG4 91 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 LINC00310P59036 64 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 PTPRBP23467 1997 aa7.38□□□□□ -1.23
COLCA1-203ENST00000532918 URB1-AS1Q96HZ7 61 aa7.37□□□□□ -1.23
COLCA1-203ENST00000532918 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
COLCA1-203ENST00000532918 ACYP2P14621 99 aa7.37□□□□□ -1.23
COLCA1-203ENST00000532918 K7EIL1 84 aa7.37□□□□□ -1.23
COLCA1-203ENST00000532918 FASNP49327 2511 aaKnown RBP7.36□□□□□ -1.23
COLCA1-203ENST00000532918 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
COLCA1-203ENST00000532918 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
COLCA1-203ENST00000532918 SPTBN4Q9H254 2564 aa7.36□□□□□ -1.23
COLCA1-203ENST00000532918 DNAH10OSP0CZ25 163 aa7.36□□□□□ -1.23
COLCA1-203ENST00000532918 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
COLCA1-203ENST00000532918 TLN2Q9Y4G6 2542 aa7.35□□□□□ -1.23
COLCA1-203ENST00000532918 RPL37AP61513 92 aaKnown RBP7.35□□□□□ -1.23
COLCA1-203ENST00000532918 LCA10Q71F78 164 aa7.35□□□□□ -1.23
COLCA1-203ENST00000532918 AGRNO00468 2067 aa7.35□□□□□ -1.23
COLCA1-203ENST00000532918 MOBPQ13875 183 aa7.34□□□□□ -1.23
COLCA1-203ENST00000532918 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
COLCA1-203ENST00000532918 Q8NBF4 154 aa7.34□□□□□ -1.23
COLCA1-203ENST00000532918 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.23
COLCA1-203ENST00000532918 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.23
COLCA1-203ENST00000532918 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
COLCA1-203ENST00000532918 EP400Q96L91 3159 aa7.33□□□□□ -1.24
COLCA1-203ENST00000532918 WIPF1O43516 503 aa7.33□□□□□ -1.24
COLCA1-203ENST00000532918 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
COLCA1-203ENST00000532918 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
COLCA1-203ENST00000532918 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
COLCA1-203ENST00000532918 TP53AIP1Q9HCN2 124 aa7.32□□□□□ -1.24
COLCA1-203ENST00000532918 A0A096LNT2 108 aa7.32□□□□□ -1.24
COLCA1-203ENST00000532918 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
COLCA1-203ENST00000532918 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
COLCA1-203ENST00000532918 A0A1B0GW54 56 aa7.31□□□□□ -1.24
COLCA1-203ENST00000532918 H3BPC8 53 aa7.31□□□□□ -1.24
COLCA1-203ENST00000532918 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
COLCA1-203ENST00000532918 A0A096LNJ9 63 aa7.31□□□□□ -1.24
COLCA1-203ENST00000532918 KRTAP10-11P60412 298 aa7.31□□□□□ -1.24
COLCA1-203ENST00000532918 IGLV5-45A0A087WSX0 123 aa7.3□□□□□ -1.24
COLCA1-203ENST00000532918 USP9YO00507 2555 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-203ENST00000532918 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
COLCA1-203ENST00000532918 COL27A1Q8IZC6 1860 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-203ENST00000532918 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
COLCA1-203ENST00000532918 IGKV2-30P06310 120 aa7.29□□□□□ -1.24
COLCA1-203ENST00000532918 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
COLCA1-203ENST00000532918 A8MTW9 85 aa7.28□□□□□ -1.24
COLCA1-203ENST00000532918 EPM2AB3EWF7 344 aa7.28□□□□□ -1.24
COLCA1-203ENST00000532918 Q6ZRX8 168 aa7.27□□□□□ -1.25
COLCA1-203ENST00000532918 ELOF1P60002 83 aaKnown RBP7.26□□□□□ -1.25
COLCA1-203ENST00000532918 A8MUN3 132 aa7.26□□□□□ -1.25
COLCA1-203ENST00000532918 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
COLCA1-203ENST00000532918 PKD1L2Q7Z442 2459 aa7.26□□□□□ -1.25
COLCA1-203ENST00000532918 CSNK1G2-AS1Q8NCQ2 148 aa7.24□□□□□ -1.25
COLCA1-203ENST00000532918 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
COLCA1-203ENST00000532918 F8P00451 2351 aa7.23□□□□□ -1.25
COLCA1-203ENST00000532918 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
COLCA1-203ENST00000532918 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-203ENST00000532918 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
COLCA1-203ENST00000532918 ANKRD17O75179 2603 aaKnown RBP7.23□□□□□ -1.25
COLCA1-203ENST00000532918 LINC00313P59037 77 aa7.23□□□□□ -1.25
COLCA1-203ENST00000532918 UQCR11O14957 56 aa7.22□□□□□ -1.25
COLCA1-203ENST00000532918 PCSK5Q92824 1860 aa7.21□□□□□ -1.25
COLCA1-203ENST00000532918 KRTAP10-3P60369 221 aa7.21□□□□□ -1.26
COLCA1-203ENST00000532918 LINC01600Q96MT4 127 aa7.21□□□□□ -1.26
COLCA1-203ENST00000532918 MUC4Q99102 2169 aa7.21□□□□□ -1.26
COLCA1-203ENST00000532918 PRO0461Q9UI25 63 aa7.2□□□□□ -1.26
COLCA1-203ENST00000532918 MTORP42345 2549 aa7.2□□□□□ -1.26
COLCA1-203ENST00000532918 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
COLCA1-203ENST00000532918 A0A087WTM6 91 aa7.19□□□□□ -1.26
COLCA1-203ENST00000532918 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
COLCA1-203ENST00000532918 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
COLCA1-203ENST00000532918 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
COLCA1-203ENST00000532918 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
COLCA1-203ENST00000532918 SETD2Q9BYW2 2564 aaPredicted RBP7.18□□□□□ -1.26
COLCA1-203ENST00000532918 EPG5Q9HCE0 2579 aa7.17□□□□□ -1.26
COLCA1-203ENST00000532918 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
COLCA1-203ENST00000532918 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
COLCA1-203ENST00000532918 ERC2-IT1O76042 136 aa7.16□□□□□ -1.26
COLCA1-203ENST00000532918 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
COLCA1-203ENST00000532918 COA5Q86WW8 74 aa7.16□□□□□ -1.26
COLCA1-203ENST00000532918 Q96NJ1 140 aa7.15□□□□□ -1.26
COLCA1-203ENST00000532918 KRTAP1-1Q07627 177 aa7.15□□□□□ -1.26
COLCA1-203ENST00000532918 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
COLCA1-203ENST00000532918 POLQO75417 2590 aa7.15□□□□□ -1.26
COLCA1-203ENST00000532918 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms