RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 WFDC13Q8IUB5 93 aa10.53□□□□□ -0.72
PCDHA3-202ENST00000532566 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.72
PCDHA3-202ENST00000532566 PRYO14603 147 aa10.52□□□□□ -0.73
PCDHA3-202ENST00000532566 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
PCDHA3-202ENST00000532566 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
PCDHA3-202ENST00000532566 C7orf33Q8WU49 177 aa10.52□□□□□ -0.73
PCDHA3-202ENST00000532566 C6orf48Q9UBA6 75 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 C5orf47Q569G3 176 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 Q8N3U1 123 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 TRBV7-7A0A0K0K1E9 115 aa10.51□□□□□ -0.73
PCDHA3-202ENST00000532566 HELZ2Q9BYK8 2649 aaKnown RBP10.5□□□□□ -0.73
PCDHA3-202ENST00000532566 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
PCDHA3-202ENST00000532566 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
PCDHA3-202ENST00000532566 Q6ZVQ6 151 aa10.49□□□□□ -0.73
PCDHA3-202ENST00000532566 KRTAP24-1Q3LI83 254 aa10.48□□□□□ -0.73
PCDHA3-202ENST00000532566 AKAP13Q12802 2813 aa10.48□□□□□ -0.73
PCDHA3-202ENST00000532566 LY6G6CO95867 125 aa10.48□□□□□ -0.73
PCDHA3-202ENST00000532566 ATP5EP56381 51 aaPredicted RBP10.47□□□□□ -0.73
PCDHA3-202ENST00000532566 C19orf73Q9NVV2 129 aa10.47□□□□□ -0.73
PCDHA3-202ENST00000532566 IGLV9-49A0A0B4J1Y8 123 aa10.46□□□□□ -0.73
PCDHA3-202ENST00000532566 GIG44P09565 113 aaPredicted RBP10.46□□□□□ -0.73
PCDHA3-202ENST00000532566 DSPP15924 2871 aaKnown RBP10.46□□□□□ -0.74
PCDHA3-202ENST00000532566 ZNF575Q86XF7 245 aa10.46□□□□□ -0.74
PCDHA3-202ENST00000532566 LAMA1P25391 3075 aa10.45□□□□□ -0.74
PCDHA3-202ENST00000532566 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
PCDHA3-202ENST00000532566 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
PCDHA3-202ENST00000532566 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
PCDHA3-202ENST00000532566 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
PCDHA3-202ENST00000532566 KRTAP1-3Q8IUG1 177 aa10.43□□□□□ -0.74
PCDHA3-202ENST00000532566 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
PCDHA3-202ENST00000532566 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
PCDHA3-202ENST00000532566 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
PCDHA3-202ENST00000532566 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
PCDHA3-202ENST00000532566 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
PCDHA3-202ENST00000532566 Q9BRP9 147 aa10.4□□□□□ -0.74
PCDHA3-202ENST00000532566 A0A087WSZ3 146 aa10.39□□□□□ -0.75
PCDHA3-202ENST00000532566 PRLHP81277 87 aa10.39□□□□□ -0.75
PCDHA3-202ENST00000532566 SPATA3Q8NHX4 192 aa10.39□□□□□ -0.75
PCDHA3-202ENST00000532566 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
PCDHA3-202ENST00000532566 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
PCDHA3-202ENST00000532566 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
PCDHA3-202ENST00000532566 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
PCDHA3-202ENST00000532566 CXCL6P80162 114 aa10.37□□□□□ -0.75
PCDHA3-202ENST00000532566 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
PCDHA3-202ENST00000532566 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
PCDHA3-202ENST00000532566 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
PCDHA3-202ENST00000532566 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
PCDHA3-202ENST00000532566 PRR4Q16378 134 aa10.36□□□□□ -0.75
PCDHA3-202ENST00000532566 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
PCDHA3-202ENST00000532566 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
PCDHA3-202ENST00000532566 SMCR5Q8TEV8 140 aa10.34□□□□□ -0.75
PCDHA3-202ENST00000532566 KRTAP1-1Q07627 177 aa10.34□□□□□ -0.75
PCDHA3-202ENST00000532566 VCANP13611 3396 aa10.33□□□□□ -0.76
PCDHA3-202ENST00000532566 FRYQ5TBA9 3013 aa10.33□□□□□ -0.76
PCDHA3-202ENST00000532566 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
PCDHA3-202ENST00000532566 Q6ZQT0 140 aa10.32□□□□□ -0.76
PCDHA3-202ENST00000532566 TEP1Q99973 2627 aaKnown RBP10.31□□□□□ -0.76
PCDHA3-202ENST00000532566 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
PCDHA3-202ENST00000532566 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
PCDHA3-202ENST00000532566 Q8N9L7 120 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 IGLV6-57P01721 117 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 DNAH10OSP0CZ25 163 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 VPREB1P12018 145 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 C1orf134Q5TEV5 83 aa10.3□□□□□ -0.76
PCDHA3-202ENST00000532566 LOC110117498A0A087WWA1 95 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 MDFIQ99750 246 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 DEFB116Q30KQ4 102 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 Q6ZRX8 168 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
PCDHA3-202ENST00000532566 Q6ZRP5 223 aa10.28□□□□□ -0.76
PCDHA3-202ENST00000532566 V9GYY9 64 aa10.27□□□□□ -0.77
PCDHA3-202ENST00000532566 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
PCDHA3-202ENST00000532566 DNAH14Q0VDD8 3507 aa10.26□□□□□ -0.77
PCDHA3-202ENST00000532566 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
PCDHA3-202ENST00000532566 A0A1B0GW54 56 aa10.25□□□□□ -0.77
PCDHA3-202ENST00000532566 HCG22E2RYF7 251 aa10.24□□□□□ -0.77
PCDHA3-202ENST00000532566 CRYGAP11844 174 aa10.24□□□□□ -0.77
PCDHA3-202ENST00000532566 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
PCDHA3-202ENST00000532566 BCE1O60756 84 aa10.23□□□□□ -0.77
PCDHA3-202ENST00000532566 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
PCDHA3-202ENST00000532566 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
PCDHA3-202ENST00000532566 Q8NBF4 154 aa10.23□□□□□ -0.77
PCDHA3-202ENST00000532566 C16orf90A8MZG2 172 aa10.21□□□□□ -0.77
PCDHA3-202ENST00000532566 SEC61GP60059 68 aa10.21□□□□□ -0.78
PCDHA3-202ENST00000532566 NBEAQ8NFP9 2946 aa10.2□□□□□ -0.78
PCDHA3-202ENST00000532566 CR1P17927 2039 aa10.2□□□□□ -0.78
PCDHA3-202ENST00000532566 NBDYA0A0U1RRE5 68 aa10.19□□□□□ -0.78
PCDHA3-202ENST00000532566 ST20-AS1Q8NBB2 130 aa10.19□□□□□ -0.78
PCDHA3-202ENST00000532566 PHF5AQ7RTV0 110 aaKnown RBP10.18□□□□□ -0.78
PCDHA3-202ENST00000532566 SMIM29Q86T20 159 aa10.18□□□□□ -0.78
PCDHA3-202ENST00000532566 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
PCDHA3-202ENST00000532566 LINC00476Q8WZB0 136 aa10.18□□□□□ -0.78
PCDHA3-202ENST00000532566 H0Y9P7 68 aa10.17□□□□□ -0.78
PCDHA3-202ENST00000532566 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms